Agrobacterium sp. 13-2099-1-2: A6U84_08320
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Entry
A6U84_08320 CDS
T11288
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00300
Lysine biosynthesis
agrz00550
Peptidoglycan biosynthesis
agrz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A6U84_08320
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A6U84_08320
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agrz01011
]
A6U84_08320
Enzymes [BR:
agrz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
A6U84_08320
Peptidoglycan biosynthesis and degradation proteins [BR:
agrz01011
]
Precursor biosynthesis
Amino acid ligase
A6U84_08320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UZX40766
LinkDB
All DBs
Position
Circular:complement(1668000..1669460)
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AA seq
486 aa
AA seq
DB search
MNLRDISGTAFPELNELLLSEIGAIEIGGITADSRKAAPGSLFVAVAGTKADGAAYVKDA
VAKGAVAVVSGHAVDADVPVLAVTDPRLYLSLAASRFYGKQPETMVAVTGTAGKTSVASF
VRQIWAFAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELAAEGVTHAAMEASS
HGLDQRRLDGVKLAAAGFTNLGRDHMDYHPTNKDYMAAKMRLFDTLMEKGAPAVIFADDP
WSDKAIRAAADAGLNVRTVGRKGDYLTLKRVEHFRHKQLIEVHHDGVIHEVDIPLAGDFQ
VANALVAAGLAMSTGVSAPTAMKALEKLIGAAGRLELVGQTKNGALAYVDYAHKPDALEN
VLTSVRPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSE
VMAAAPGALEIGDRAEAIRHAVSLLSNGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRTA
LEGLKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcgagatatatccgggacggcgtttccggaattgaatgaattgctcctgtct
gagataggggcaatcgaaatcgggggaattaccgcagacagccgcaaggctgcgcccggc
agcctgttcgtggcggttgcgggaaccaaggcggatggcgcggcctatgtgaaggacgcg
gtcgccaagggtgcggtcgccgtcgtttccgggcatgcggtggatgccgatgtgccggtc
cttgctgtcaccgacccgcgcctctacctttcgctcgccgcttcccgtttttacggaaaa
cagcccgaaaccatggtcgccgttaccggcacagcgggaaagacctccgttgcctccttc
gtgcggcaaatctgggctttcgctggccatgccgccgcccagatcggcacgacgggtgtc
atcgctcccggccgcgaagattatggcgcgcttaccacaccggatccggtgacgctgcat
gcgcttctcgccgagcttgctgccgaaggtgtgacccatgcagccatggaagcttcgagc
cacggcctcgaccagcgtcgccttgacggcgtgaagctcgctgcggccggtttcaccaat
ctcggccgtgatcacatggattatcacccgaccaacaaggactacatggccgcgaagatg
cggctgttcgacacgctgatggaaaagggcgcgccagccgtcatttttgccgacgaccct
tggtcggataaggccattcgcgccgccgcggatgcaggcctcaatgtgcgcaccgttggc
cggaagggcgattatctaacgctgaagcgtgtagagcatttccgtcacaagcagctgatc
gaagtgcaccatgacggcgtgatccacgaagtcgacattccgctggccggcgattttcag
gtagccaatgctctcgtcgccgccggtcttgccatgtccaccggcgtttccgccccaacg
gccatgaaggcgcttgaaaagctgatcggtgctgccggtcgcctggaacttgtgggccag
acgaagaacggcgcgcttgcctatgtggattatgcccacaagccggatgcgcttgaaaat
gttctgacctcggtcaggcccttcacctccggccgcatcatcaccgtcttcggctgcggc
ggcgaccgtgacaagggcaagcgcccgatcatgggcgaagtggcgacacgtctttccgac
atcgttatcgttaccgacgacaatccgcgctcggaagacgctgcaacgatccgttccgaa
gtcatggcggctgcgccgggtgcgttggaaattggcgatagggcagaggcgatccgtcat
gcggtgtcgctgctttcgaacggcgatacgctgatcgtcgcgggcaaggggcatgaagag
gggcagatcgtcggttccgtgacgctgccgttttccgatcatgaacaggtgcgtaccgcg
ctggaaggattgaagatttga
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