Agrobacterium sp. 13-2099-1-2: A6U84_09675
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Entry
A6U84_09675 CDS
T11288
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz01501
beta-Lactam resistance
agrz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A6U84_09675
01503 Cationic antimicrobial peptide (CAMP) resistance
A6U84_09675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrz03036
]
A6U84_09675
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agrz02000
]
A6U84_09675
01504 Antimicrobial resistance genes [BR:
agrz01504
]
A6U84_09675
Chromosome and associated proteins [BR:
agrz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
A6U84_09675
Transporters [BR:
agrz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
A6U84_09675
Antimicrobial resistance genes [BR:
agrz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
A6U84_09675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
Beta-barrel_RND_2
CzcB_C
BSH_CusB
Beta-barrel_ALG44
VIT_2
Beta-barrel_AAEA
CobA_CobO_BtuR
Beta-barrel_RND
HH_EMRA
BSH_CzcB
BSH_YknX
DUF4407
BSH_RND
Motif
Other DBs
NCBI-ProteinID:
UZX41016
LinkDB
All DBs
Position
Circular:1955761..1956954
Genome browser
AA seq
397 aa
AA seq
DB search
MQHKVTFNRFVFLFLSATALPFSAVAEGELPEPVKQQNLPSIIVAHAATRDLVDRIIATG
TIRPVDEIYVQPLVDGLSIDELNVDIGDRVEANAVLAVLSSDSLLLQKSQLEANRAKAQA
AVAQSKAQVLEAEANKADALRQRDRAAKLGQSGSGSVSETEKTEAAAQVAQARLDAAKQT
VSAGEADIKVVDAQIDDINLKLTRTGVKTPVTGIVSAKNAKVGAIASGAGNPLFTIIKDG
AIELVADLSETDIQRVKAGQKAFLTVAGGAQKIEGKVRLVSPTVDPATRLGSVHVVLPTD
SPARSGMYASAEIIVKETNALALPLSAVTSGREGSTTRKVEGDIVKQVKIETGIEDSGFI
EIVSGLAAGDKVVEKAGAFVRDGDRIRPVEAQTAASN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataaagtcacgtttaaccgctttgttttcctttttctttccgcaacggccctg
ccattttcggctgtggccgagggagaattgccggaaccggtcaaacagcagaacctgcct
tccatcatcgtcgcgcacgccgcaacacgcgatctcgtggaccgcatcatcgccaccggc
accatcaggcccgtggacgaaatttatgtacagccgctggtcgacggcctgtcgatcgac
gaactgaacgtcgatatcggcgacagggtcgaggcgaatgcggttctggccgtgctttcc
tcggacagtcttctcctgcaaaaaagccagcttgaggccaacagggccaaggcgcaggcc
gccgttgcgcaatccaaggcgcaggttttggaggctgaggccaacaaggcggatgccctt
cgccagcgcgaccgcgccgccaagctcggccagagcggttccggttccgtctccgagacg
gaaaaaaccgaggccgctgcccaggttgcgcaggcacgccttgatgccgccaagcagacc
gtttccgccggagaggcagacatcaaggtcgtcgacgcgcagattgacgacatcaatctg
aaactgacgcgcacgggtgtgaaaacccccgtcaccggcatcgtttccgccaagaatgcc
aaggtcggcgccatcgccagcggcgccggaaacccgcttttcacgatcatcaaggacggc
gcgatcgagcttgtcgccgatctttccgagaccgacatccagcgggtgaaggccggccag
aaagctttcttgacggttgccggcggagcccaaaaaattgagggcaaggtgcgtctcgtt
tcgccgaccgtcgatccggcaacgcgccttggttccgtgcatgttgtgctgccgacggac
agcccggcacggtcgggcatgtatgccagcgcggagatcatcgtgaaagagacgaacgcg
cttgccctgccgctttcggccgtcacctccgggcgtgaaggctcgaccacccgcaaggtg
gaaggcgacatcgtcaagcaggtgaagatcgagaccggcattgaagacagcggtttcatc
gagattgtcagcggacttgccgctggtgacaaggttgtcgagaaagctggagcattcgtg
cgtgatggtgaccggataagaccggtggaagcccagacggctgcgtccaactga
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