Agrobacterium sp. 13-2099-1-2: A6U84_20620
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Entry
A6U84_20620 CDS
T11288
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6U84_20620 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_20620 (nth)
Enzymes [BR:
agrz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A6U84_20620 (nth)
DNA repair and recombination proteins [BR:
agrz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6U84_20620 (nth)
Prokaryotic type
A6U84_20620 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UZX44467
LinkDB
All DBs
Position
Linear:complement(1585795..1586577)
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AA seq
260 aa
AA seq
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MTVAKKRSSTQTLKKSNATSARRPARVKTIYSKDELNEIFRRFSIQRPEPKGELEHTNPF
TLLVAVALSAQATDVGVNRATRALFRVADTPQKMLALGEEELIGHIKTIGLYRNKAKNVI
ALSQMLIDNFGGEVPRTREELVTLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCL
APGKTPDEVEDRLVRIIPEEYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEKTF
DIPAPLVELPAQLFGAASGE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgccaaaaaacgatccagcacccaaacattgaaaaagtcaaatgcgacatcc
gcccgcagaccggcgcgtgtgaagacgatctattcgaaggacgagttgaacgagatcttc
cgccgtttctccattcagcggccggagccgaaaggcgagctggaacataccaaccccttt
accctgctggtggccgtggcgctttcggcgcaggcgaccgatgtgggcgtaaaccgggcg
acgcgggcgctgttcagggtggccgatacgccgcaaaaaatgctggcacttggcgaggag
gagctgatcggccatatcaagaccatcgggctttaccgcaacaaggccaagaacgttatc
gctttgtcacagatgctgatcgacaatttcggcggtgaggtgccgaggacgcgcgaggag
ctggtgaccctgcccggcgtcggccgcaagacggccaatgtggtgatgtcgatggccttc
ggtgtgcccacactcgccgtggacacccatgtttttcgtattgccaaccggctctgtctt
gcgccggggaaaaccccggatgaagtggaagaccggctcgtccgcatcattcccgaagaa
tatctgttccatgcccatcactggctgatcctgcacgggcgttattgctgcaaggcgcgc
aaaccggaatgcgagcgctgcgtgattgccgatatctgcaaatcaccggaaaagaccttc
gatattccagctccgctggtggaactacccgcgcaattgttcggtgcggccagcggcgaa
tga
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