Agrobacterium sp. 33MFTa1.1: EYD00_09975
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Entry
EYD00_09975 CDS
T05906
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt01501
beta-Lactam resistance
agt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EYD00_09975
01503 Cationic antimicrobial peptide (CAMP) resistance
EYD00_09975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agt03036
]
EYD00_09975
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agt02000
]
EYD00_09975
01504 Antimicrobial resistance genes [BR:
agt01504
]
EYD00_09975
Chromosome and associated proteins [BR:
agt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EYD00_09975
Transporters [BR:
agt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EYD00_09975
Antimicrobial resistance genes [BR:
agt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EYD00_09975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
VIT_2
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
QBJ13687
LinkDB
All DBs
Position
circular:1967673..1968869
Genome browser
AA seq
398 aa
AA seq
DB search
MQHKVTFNRILFLLLLSATALPLPAAAEGEAQAPVKQQNVPSIIVAHVAKRDLVDRVIAT
GTIRPVDEIYVQPLVDGLSIDTLNADIGDRVAANAVLAVLSSDSLVLQKSQLEANKAKAE
ASVTQSKAQVLEAQANLADALRQRDRAAKLSQTGSGSISETEKTEALAQVAQARLDAAKQ
AVSAGEADIKVVDAQIADIDLKLTRTGVKTPVAGIVSAKNAKVGAIASGAGNPLFTVIKD
GAIELVADLSETDIQNVKVGQKAYLTVAGGRAKIEGKVRLVSPTVDPTTRLGSVHVVLPE
NSPARSGMYASAEIVIEETNALALPLSAVTSGREGSTARKVEGDVVKQVKIETGIEDGGF
IEIVSGLAAGDKVVEKAGAFVRDGDRIRPVEAQTAASN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataaagtcacgtttaaccgcattcttttccttcttcttctgtccgcaacggcg
cttccccttccagcagccgcggagggagaggcacaggcgccggtgaaacagcagaacgtg
ccctcgatcatcgtcgcgcatgtcgcaaagcgcgacctcgtggaccgtgttattgcgaca
ggcacaatccgcccggtggacgaaatctacgtccagcccctggtcgacggcctgtcgatc
gacaccttgaacgccgatatcggcgaccgggtggcggcgaatgcggttctggccgtcctg
tcctccgatagcctcgtcctgcaaaagagccagctcgaagccaacaaggccaaggccgaa
gcttccgtcacccagtccaaggcgcaggtgctggaggcgcaggccaatctggccgacgcc
cttcgccagcgcgaccgcgccgccaagctcagccagaccggttcaggctccatttccgaa
acggaaaagaccgaagccctcgcgcaggtggcgcaggctcgcctcgatgcggccaagcag
gccgtttccgccggcgaagccgacatcaaggtggttgacgcgcagatcgccgatatcgat
ctcaagctcacgcgcaccggcgtgaaaaccccggtcgccggcatcgtttcagccaagaac
gccaaggtgggcgcgattgccagcggcgccggaaacccgcttttcaccgtcatcaaggac
ggcgccatcgaacttgttgccgatctttccgaaaccgacattcaaaacgtgaaagtcggc
cagaaagcctatttgacggttgctggcggaagagcgaaaatagaaggcaaggtgcgcctc
gtttcgccgaccgtcgatccgacgacgcgcctcggttccgtgcatgtggtgctgccggaa
aacagcccggcgcgatcgggcatgtatgccagcgcagagatcgtgatcgaggagacgaac
gcgctcgccttgccgctctcggctgtcacttccgggcgtgaaggctcgaccgcccgcaag
gtggagggcgacgtcgtcaagcaggtgaagatcgagaccggcatagaagacggtggattc
atcgagatcgtcagcggccttgccgctggagacaaggttgtcgagaaagctggagcattc
gtgcgtgatggtgaccggataagaccggtggaagcccagacggctgcgtccaactga
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