Agrobacterium sp. 33MFTa1.1: EYD00_09980
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Entry
EYD00_09980 CDS
T05906
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt01501
beta-Lactam resistance
agt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EYD00_09980
01503 Cationic antimicrobial peptide (CAMP) resistance
EYD00_09980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agt02000
]
EYD00_09980
01504 Antimicrobial resistance genes [BR:
agt01504
]
EYD00_09980
Transporters [BR:
agt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EYD00_09980
Antimicrobial resistance genes [BR:
agt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EYD00_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QBJ13688
LinkDB
All DBs
Position
circular:1968883..1972203
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AA seq
1106 aa
AA seq
DB search
MNFSAWSIRNPIAPLLGFALLMMLGMQAFNTLPITRFPNIDVPVVAVTVTQSGASPSELE
MQVTKEIEDAVAAISGVDEIQSTVVDGQSTTTVVFRIEKPTEEAVQDTKDAIDKIRSDLP
SDIEVPVVSKIDVEGQAIQTFAVSSPNMTLEELSWFVDDTIKRSLQGQSGIGKVDRYGGA
DREVRVSLSPEKLDAYGITATEVNSQLRGTNIDLGSGRGQVGGNEQTIRTLGDTRDVSQL
ANTTIALSNGRFVKLSELGTVTDTYEEQKSFSRFNGNPAVTFAVFRSKGASEVSVAETVA
QSLDQVRKDHPDVSIEMVDDAVYFTYGNYKAALDTLIEGAILAVIVVLLFLRNWRATLIA
AVALPLSAIPTFWIMDIMGFSLNLVSFLALTLATGILVDDAIVEIENIARHIKMGKTPYR
AALEAADEIGLAVIATSFTIIAVFVPVSFMPGIPGQYFIQFGLTVAFSVFFSLAVARLIT
PLMAAYLMRAEDAMDDHHDNDGRLMKAYTRMVTATTRKWWARYLTLLGAIAFLIASVMLL
SQVPGSFLPPDDASRVTLSVELPPNATLDETDRTTTQIYQAIRDINGVESVFILGGASPK
GDLELRRATVNVILEHIDHSLLKTLVNKGLGSIPLIGQYLPKLEEKGRTRPQWDVERDIF
AQVRGIADVRIIKLNDRAERELSFNFLSTNEKDLNDAVGILESRLRASPILANVSSEGAL
PRPELQIRPRKDEIARLGITPQQISQTVRVATIGDIDAQLTKISLDDRQIPIRVQASLDT
RRDLATIRALKIKTASGSLVPLYSVADIDYSEGPSSIKRNDRNRVVSIGSDVPFGTALDT
STAEFKRIVSETNLPASVRLAESGDAKVQGEMQQGFVNAMLLGLMLVLVVLILLFKDVIQ
PFTILFSLPLAIGGVAVALIITQNALSMPVLIGILMLMGIVTKNAILLVDFAIEMRRHGM
ERVHAMVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSFRAPMAIAVIGGIIVSTVLS
LIVVPAFFLIMDDLSRLLAHLFGRFVGKKEEEEEALSNEKLSEIARENSLALSSLEARVA
SMEKGSGDKAADKGSNILRLPPLAAE
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccgcatggtcaatccgtaacccgattgcgccgcttctcggcttcgcgctt
ttgatgatgctcggcatgcaggcgttcaatacgctgccgatcacacgtttcccgaatatc
gacgtgcccgtcgtcgccgtcaccgtgacccagagcggggcttcgccctccgaactggag
atgcaggtgacgaaggagatcgaggacgccgttgccgccatcagtggcgtcgacgaaatt
cagtccaccgtggtcgacggccagtcgacgacaacggtcgtgttccgtatcgaaaaaccg
acggaagaagcggttcaggacaccaaggacgccatcgacaagatccgcagcgatcttccc
tccgatatcgaagtgcccgtcgtcagcaagatcgacgtcgagggacaggcgatccagacc
ttcgccgtctcttcgccgaacatgacgctggaggaactgtcctggttcgtggatgacacg
atcaagcgctcgctgcagggccagtccggcatcggcaaggtcgaccgttacggcggcgcg
gaccgcgaggtgcgcgtttcgctcagccccgaaaagctcgatgcctatggcatcaccgcg
acagaggtgaacagccagctgcgcggcaccaatatcgacctcggctccggccgcggccag
gtgggcggcaacgagcagaccatccgcacgctgggcgatacacgcgatgtaagccagctt
gccaacaccacgattgcgctttccaacggccgcttcgtcaagctttccgaactcggcacg
gttacggacacatatgaagagcagaagtccttctcgcgcttcaacggcaatccggccgtc
acctttgcggtgttccgctccaagggcgcgagcgaggtttcggtcgccgaaaccgtcgcg
caaagtctcgatcaggtccgcaaggaccaccccgatgtctcgatcgagatggtcgatgac
gccgtctatttcacctatggcaactacaaggccgcactagacacgctgatcgaaggcgcg
atcctcgccgttatcgtggtccttctcttcctccggaactggcgcgcgacactgatcgcc
gccgtggcgctgccgctttccgcgatcccgaccttctggatcatggatatcatgggcttt
tcgctcaacctcgtcagcttcctcgcgcttacgctcgccacgggtattctcgtggacgac
gccatcgtggaaatcgagaacatcgcccgacatatcaagatgggcaagacgccctatcgc
gcggccctcgaagcagccgatgaaatcgggcttgccgtcatcgcgaccagcttcaccatc
atcgccgtctttgtgcccgtctcgttcatgccgggtattccgggccagtacttcatccag
ttcggcctcactgtcgccttctcggtattcttctcgctggcagtggcccgtctcatcaca
cccctgatggcggcctatctgatgcgcgccgaagacgcgatggacgatcaccacgacaat
gacggcaggctgatgaaggcctatacgcgcatggtgaccgccaccacgcggaaatggtgg
gcgcgttatctcacgctattgggagcgattgccttcctcatcgcctcagtgatgctgttg
agccaggtccccggcagcttcctgccgcctgatgacgcctcgcgtgtcaccctgtccgtt
gaactgccgcccaatgcgacgctggatgagaccgaccgcacgacgacgcagatctaccag
gcgatccgtgacatcaacggcgtggaaagcgtcttcatcctcggtggtgcttcgcccaag
ggggacctggagctgcgccgcgccaccgtcaatgtcatccttgagcatatcgatcactca
ctgctgaaaacgctcgtcaacaaggggctcggctccattccgctcatcggccaatatctt
cccaagctggaggagaagggccgtacacgtccgcaatgggatgtcgagcgggatattttc
gcgcaggtgcgtggcattgcggatgttcgcatcatcaagctgaacgaccgcgcggaacgc
gagctttccttcaacttcctttcaaccaacgagaaggatctgaacgacgccgtgggcatt
ctcgaaagccgcctgcgcgcttcgcccatccttgccaatgtcagttcggaaggcgctctg
ccccgtcccgaactgcagatccgcccgcgcaaggatgagatcgcccgcctgggcatcacg
ccgcagcagatttcgcagaccgtgcgtgtcgccaccatcggtgatatcgatgcgcagctc
acgaaaatctcgctggatgaccggcagatcccgatccgcgtgcaggcttcgctcgatacc
cgccgcgatctcgccaccatccgcgccttgaagatcaagaccgcctccggttcgctggtg
ccgctctacagcgtggccgatatcgattactcggaaggcccgagctcgatcaagcgcaac
gaccgcaaccgcgtcgtctccatcggctcggatgtgcctttcggcacggcgctcgatacg
tcgacggccgagttcaagcgcatcgtttcggaaaccaacctgccggcaagcgttcggctt
gccgaaagcggtgacgccaaggtgcagggcgaaatgcagcagggcttcgtcaacgccatg
ctgcttggcctgatgctggtgctggtcgtgctcatcctgctgttcaaggatgtcatccag
cccttcacaatcctgttctcgctgccgcttgccatcggcggcgtggcagtcgcgctcatc
atcacccagaacgcgctctccatgccggttctcatcggcattctgatgctgatgggcatc
gtgaccaagaacgccatcctgctggtggatttcgccatcgaaatgcgccgtcacggcatg
gagcgggtgcatgccatggtggaggccggccgcaagcgcgcccgcccgatcatcatgacc
tccatcgccatgtcggcaggcatgttgccctccgcgctcggcgtcggcgaaggcggttcg
ttccgcgcaccgatggcgattgcggtcatcggcggcatcatcgtttccacggtgctgtcg
ctgatcgtggtgccggccttcttcctgatcatggacgacctgtcgcgtctgctcgcccac
ctcttcggccgtttcgtcggcaagaaggaagaggaggaagaggccctctccaacgagaaa
ctctcggagatcgcccgcgaaaacagcctcgcgctttcctcgctggaggcacgggtggcc
agtatggaaaagggcagcggcgacaaggccgcggacaagggcagcaatatattgcgactg
ccgccgcttgccgccgagtga
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