Alkalicoccus halolimnae: FTX54_011030
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Entry
FTX54_011030 CDS
T09800
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal00300
Lysine biosynthesis
ahal00550
Peptidoglycan biosynthesis
ahal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FTX54_011030
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FTX54_011030
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahal01011
]
FTX54_011030
Enzymes [BR:
ahal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FTX54_011030
Peptidoglycan biosynthesis and degradation proteins [BR:
ahal01011
]
Precursor biosynthesis
Amino acid ligase
FTX54_011030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WWD78955
UniProt:
A0A5C7FHM8
LinkDB
All DBs
Position
complement(2403098..2404597)
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AA seq
499 aa
AA seq
DB search
MRVDFTADRAAGIQQVFGRSAVEIDRIAYDSRSVTPGTAFFCILGSERDGHAFIDNAAQN
GAAAVIGMNASLLEEKQQKFPGVSFILAEDSQRAMSYFSQELYGYAYKNMHTIAVTGTNG
KTTVTSFVRWLLNQSGIKTGSIGTEKVLDHKGKRNFPHSTHTTPEAPDLHYIFHKFFGEK
LKAVVLEVTSIAIEQRRVDGMMFDIGVLTNLTPEHIDYHDTFEQYKAAKMKLFHQVKKAV
VNLDDEKMGKELASTFAGPVLTYSMQEKGDVRASIVEIASSGTFITLFIHDDAYDVFLPF
FGTHNIANFMAAVCSCMHMNLPVSLLLKQLPGLQPPAGRFQFIDTCAKYRIISDFAHTPD
ALKKVITSVKQMNYSRLILLIAGNGVRDKRQLPELAEVVQGEADITVVAVEHPDRSERRE
ILIEVLNGFTEKSAPIYTELYRDKGVEKALSLAGEGDLVLLTGLGSLDHQVIEGVEVPYA
EIDVIHRYLKASKDKAGTK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagagtagatttcaccgcagacagagcagcaggaattcagcaagtgttcggccgaagt
gccgtggagattgaccgtattgcctacgattcaagatcagtaacgccgggaacggctttc
ttttgtattttaggctctgagagggacggccatgcttttatagacaatgcagcacaaaac
ggcgcggcggctgtcataggcatgaacgcttctctgttggaggaaaagcaacagaaattc
cccggagtttcttttattcttgcggaagattcccagcgtgcaatgtcttatttttcccag
gagctttacggctatgcctataaaaacatgcatactatcgccgtgaccggtacgaacggg
aaaacaacggtgacatcctttgtccgctggctgttaaaccaaagtggaattaagacggga
tcgatcggaactgaaaaagtcctcgatcataaaggaaagcgaaatttccctcattcaacg
cacacaacgccggaagcgccggatcttcattatatctttcataagttttttggagagaag
ctgaaggctgtggtgctggaagtgacttcgattgctattgaacagcgccgtgtagacgga
atgatgtttgatatcggcgttcttacaaacctgactccggaacatatcgattaccacgat
acgtttgagcagtataaggcggcaaagatgaagctgtttcaccaggtcaaaaaagctgtc
gtaaatttggatgacgagaagatgggaaaagagcttgcctctacttttgccggaccggtc
cttacgtacagtatgcaggaaaaaggtgacgtccgtgcatcaatcgtggaaatagcgtcc
agcggcacgttcatcactctgtttatccatgatgatgcctatgatgtttttctgcctttt
ttcggcactcataatattgccaacttcatggccgccgtatgttcctgtatgcatatgaat
ctacccgtttctctcctgcttaagcagctgcccggtctgcagccgccggccggacgtttc
cagtttatcgatacgtgtgcaaagtaccggatcatttccgatttcgcccacaccccggat
gctttgaaaaaagtgatcacctctgtgaagcagatgaactacagcaggctgattctgtta
atagcggggaatggagttcgggataagcgtcagcttccggagcttgcagaggtggttcag
ggagaagcggacattacggtcgtcgcagtagagcatccggaccgctcggaacgacgggaa
attttgatagaagtacttaatggattcacagaaaaatcggcaccgatatatacagaactt
tatcgtgataaaggggtggaaaaagctctttcgcttgccggtgaaggtgatctcgtgctt
ttaacaggcctcggaagtcttgatcaccaggtgattgaaggtgtcgaagttccttacgcg
gaaatagatgttattcaccgctatctgaaggcaagtaaagacaaggcaggtacgaaatag
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