Arachis hypogaea (peanut): 112701202
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Entry
112701202 CDS
T07294
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112701202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112701202
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112701202
Complex C
U5 SnRNP specific factors
112701202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
Roc
EF-G_D2
Septin
Motif
Other DBs
NCBI-GeneID:
112701202
NCBI-ProteinID:
XP_025607777
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All DBs
Position
1:98189929..98194982
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AA seq
997 aa
AA seq
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MDDSLYDEFGNYIGPEIESDQESDRDIDDDDEEDEEDQGDRRHRSAEDGAASDGEAHPNG
WITTSGNDDVEMVDNQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQSLEQSIIKQVKKK
DFEVGVKDSSTYVAPQFLLGLMSNPALVRNVALIGHLQHGKTVFMDMLVEQTHRMATFDD
QSEKHMRYTDTRKDEQERRISIKAVPMSLVLEDSNAKSFLCNIMDTPGHVNFSDEMTAAL
RLADGAVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLR
HTLEVINSHISAASSIAGDVQVIDPVAGNVCFASGTAGWSFTLQSFAKLYGKVHGIPLEA
NKFASRLWGDYYFHPDTRTFKKKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTL
AELGVKLSNAAYRLNVKPLLRLACKTVFGSASGFTDMLVQHIPSPKDAAIKKVDHIYTGP
KDSIIYKSMAHCDSSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP
DDEEDMTVKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYI
FRPLQFNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELY
LDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGL
AEDIENGVVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDK
SLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQLIPTARRVA
YSSFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLP
VIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVK
TRRRKGMSEDVSISKFFDEAMMVELAQQAAVLHQQMM
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagcttatacgacgagtttggcaactacatcgggcccgaaatcgagtccgac
caagaatccgacagagacattgacgacgacgacgaagaggatgaggaagaccaaggtgac
cgacgccaccgttccgccgaagacggcgccgcatccgatggcgaggcccatccgaacggc
tggatcacgacctcagggaacgacgacgtggagatggtggacaaccaggtggtcctggcg
gaggacaagaagtactaccccaccgccgaggaggtttacggcgaagacgtggaaacccta
gtcatggatgaagatgagcagtctctggaacagtcaatcatcaagcaagtaaagaagaag
gacttcgaggttggcgtgaaggactcttcaacctacgtggctccgcagtttctgttaggg
ttaatgtcgaaccctgcgcttgtgaggaatgtggcgcttatcgggcaccttcagcatggt
aagacggtgttcatggacatgcttgttgagcagacccatcgtatggcgacgtttgatgac
cagagtgagaagcatatgaggtacactgataccaggaaagatgaacaggagagaaggatt
tcaattaaggccgttccaatgtcgctcgtgcttgaggatagtaatgccaagtcgtttttg
tgtaatattatggacactcctggccatgttaatttctctgatgagatgactgcggctttg
aggctcgctgatggtgccgttttgatcgtcgatgctgctgaaggagtcatggtaaacact
gagagggcaatacgccatgcaatccaggagcggcttcctatagttgttgtaatcaataag
gttgacaggctcataactgagcttaaattacccccaaaagatgcttaccataaactaagg
catacactggaagtaatcaatagtcacatatctgctgcatcttctattgctggggatgtc
caagttattgatccagttgctgggaacgtttgttttgcaagtggcactgctggatggtca
tttacgttgcaatcatttgctaaactgtacgggaaggtgcatggaattcctctggaagca
aataaatttgcttctcgcctttggggggactactattttcatccagataccagaaccttt
aaaaagaaaccccctgccagtggaggtgaacgatcttttgttgagtttgtactggaacca
ctttacaagatttatagccaagtgattggagaacataaaaagagtgtagagacaaccctg
gcagaacttggagttaaactaagtaatgcagcctatagattaaatgttaaacctttgtta
aggctggcttgtaagacagtctttggttcagcttctggttttactgatatgcttgttcag
catattccttcaccaaaagatgctgcaattaaaaaagttgatcatatatatactgggcct
aaagactcaatcatttataaatccatggcacattgtgactcttctgggcccctgatggtt
aatgtaaccaaattgtaccccaaatctgattgcagtgtgtttgatgcttttggtagagtt
tatagtggcaagatacagacaggacaaactgtacgggttctaggagaaggatactcaccg
gatgatgaggaggacatgaccgtgaaagaggtaacaaagttgtgggtgtatcaagctcga
gataggatgccaattgctgaggctcctcctgggtcttgggtcttaattgaaggcgtggat
gcttcaatcatgaaaactgccactctttgtaatgtagattatgatgaggatgtatatata
ttccggcctcttcagttcaatactctgtcagtggttaaaacagctacggaacctttaaat
ccaagcgagttgccgaaaatggtagagggcctcaggaaaatcagcaaaagttatcctctg
gccattactaaagtggaggagtctggggagcacactatattagggactggtgagctgtac
ttggattcaatcatgaaggacctcagggagctttattctgaagtggaagtcaaggtggca
gatcctgttgtatcattctgtgaaactgttgtcgagtcgtcttcaatgaaatgttttgcc
gagacaccaaataagaagaacaaaataactatgattgccgaaccactagaaagaggtctt
gctgaggacatagagaatggtgtcgttagtactgactggaatcggaaaaaactaggggaa
ttctttcagactaagtatgattgggatctccttgctgcacggtcaatctgggcgtttggc
cctgataagcagggccccaatattctgttagatgacacccttccaactgaagttgacaag
agcctgctgaatgctgtcaaggattccattgttcagggatttcagtggggtgcacgagag
ggacctctgtgtgatgaacccatcagaaatgttaaattcaagattgttgatgcaagaatt
gctcctgagccacttcataggggatctggccagttaattccaacagcacgacgagtggcc
tattcttcctttcttatggctacccctcggcttatggaaccagtatattatgtggagatt
caaacaccaatagattgtgtatctgcaatctacactgtgttatctcgtaggcgtggacat
gttactgctgatgttcctcaaccaggcaccccagcttatattgttaaggctttcttgccc
gtgattgaatcttttggtttcgagacagacctgagatatcacactcaaggtcaagcattt
tgcctctctgtttttgatcactgggctattgttcctggagatcctctggacaaaagcatt
gttttgcgtccacttgaaccagcaccaattcaacatcttgctcgtgagtttatggtgaaa
acaaggcgtagaaagggaatgagcgaggatgtaagcattagcaagttcttcgatgaagct
atgatggtggaactggcacagcaggcagcagttcttcatcaacaaatgatgtga
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