Arachis hypogaea (peanut): 112758237
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Entry
112758237 CDS
T07294
Name
(RefSeq) 5'-3' exoribonuclease 4
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112758237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112758237
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
112758237
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
112758237
NCBI-ProteinID:
XP_025662635
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All DBs
Position
16:18747749..18756449
Genome browser
AA seq
1039 aa
AA seq
DB search
MLKNITGKPTSKLKSVEGTSKGAIRRRAVRSHQIRRPPQWPVHFYTATQISPYPSSVTHN
LVSLSFFLSLSLSSCAGPNRSGTMGVPAFYRWLADRYPLSISDVVEEEVPAASEGGAPPF
FVDISKPNPNGMEFDNMYLDMNGIIHPCFHPDGKPAPATYNDVFKSIFDYIDHLVSLVRP
RKLLYLAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEEMLRKEFEGELELLPSKDKPET
SDSNVITPGTPFMAVLSLALQYYVQTRLNYNPGWQNIKVILSDSNVPGEGEHKIMEYIRS
QRNLPGFNPNTRHCLYGLDADLIMLSLATHEVHFSILREVITFPGQQEKCYQCGQVGHLA
ADCRGKPGEKPEDWNPVDDTPIHKKKYQFLNIWVLREYLQYELDIPNPPFVIDFEHIVDD
FVFLCFFVGNDFLPHMPTLEIREGALNLLMHIYRKEFTAIGGYLTDAGEVFLDRVEHFIQ
SLAVHEDQIFQKRVRIQQASEINEEMRARARGEMPEEPRASVVDKVKLGEPGYKERYYAE
KFGVSDPEEIEKTRKDTVLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLNDL
EITFFMGEPFKPFDQLMGTLPASSSSALPEKYRDLMSDPTSPIFEFYPADFEIDMNGKKF
AWQGVAKLPFIDEKKLLDATRKLEGTLTGEEQLRNSKMYDLLYVSFAHDLAPHIVLYYQY
NSNLPIHERPAWPIDPNASGGMNGFLWLCDRNVFRSSVLSPIEGLQDIDHNQVLNITYFN
PRKHSHIPEPPAGVVMPKKILKAIDIKPFPVLWHEDNGGRRQFGRERPHVPGAIAGPQLG
EAAHRLVKNSLNIKSNNTSHGFSEQLPGYNTMNRLRPAGPSGSGKYYGEDTSGYYGHYPN
QHGMINRPRYPISSNGGPSDRQNFRMQHHEHQFHNVRTGFSALTMEDGMRPRLSAPKTPA
MMFLRPPNTGSANNMQQQFVQNIGPPIPPPKWITKGPDTNGVYARHQEVGFGGSYDKQMK
KVYQIRTRQTQDMPEYGNR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaatatcactggaaagccaacatcaaaattaaaaagcgtcgaggggacaagt
aagggcgcaattaggagaagggcagttcggtcccatcaaataaggcggccaccacagtgg
cccgtacatttctacacggcgacacagatctccccctatccctcatcagttactcacaat
ttagtttctctctctttttttctttccctttctctatcttcctgtgccgggccgaaccgt
tccggcactatgggagtcccagcgttttatcggtggctcgctgaccggtatcccctctcc
atctccgacgtcgttgaggaagaggtcccggccgcctccgaaggcggcgcacctccgttc
tttgttgatatctcaaaacctaatcccaatggcatggagttcgacaacatgtacctcgac
atgaacggcatcatccatccttgttttcaccccgatggaaagccagcacctgctacctat
aacgatgtgttcaaatcaatatttgattacatcgaccatctcgtttcgttggttcgtcca
aggaagctgctctatcttgcaattgatggagttgcacctagagccaaaatgaatcagcaa
cgttctcggcgcttccgagctgcaaaagatgcagctgaggctgaagctgaagaggaaatg
ctgaggaaagaatttgagggtgagttggaacttttgccttctaaagacaagcctgagact
tctgactcaaatgtcatcacccctggcactccatttatggcggtgctgtcgctggctctt
cagtattatgtacaaactagattgaactacaaccctggctggcagaatataaaggttata
ctttctgactcaaatgtccctggcgaaggagaacataaaataatggaatatatccgatca
caacgtaaccttcccggttttaacccaaatactcggcattgtttgtatgggttggatgct
gatttgattatgctttcgttggctacacatgaggttcacttctcgatattgagggaggta
attactttccccggacaacaagagaagtgttatcagtgtggtcaagttggccatcttgca
gctgactgtcgtggtaaaccaggtgaaaaacctgaggactggaatcctgttgatgatacc
cccattcacaagaagaaatatcagtttcttaacatttgggtactgcgggaatatctgcaa
tatgaattggacatacccaatcctcctttcgtgattgactttgagcacatagtggatgat
tttgtattcctatgtttctttgttggcaatgattttcttccacatatgccaacattagag
attcgggagggtgctttgaatttattgatgcatatttatagaaaggaattcactgcgatt
ggtggttatcttactgatgcgggtgaggttttcttagacagagtggaacattttatccaa
tctcttgctgttcacgaagatcaaatatttcagaaacgagttcgaattcagcaggcttca
gaaataaatgaagagatgagagcaagggcaagaggagaaatgccagaagagccacgtgcc
tctgttgtggataaggttaagttaggggaacctggatacaaggaaaggtattatgctgaa
aaatttggtgtatcagatcctgaggagattgagaaaactaggaaagatacggtcttgaaa
tacgtggaaggcctttgttgggtttgtcgatattactatcaaggtgtctgttcttggcaa
tggtactacccataccattatgctccttttgcttcagatcttaaagatctaaatgatcta
gaaataacttttttcatgggggaaccatttaaaccttttgatcagctcatggggacccta
ccagcttcaagctcaagtgctttgcctgaaaagtatagggatttgatgagtgatccaaca
tcacctatttttgaattttatcctgctgattttgagattgatatgaatggcaaaaaattt
gcttggcagggtgttgccaagttgccattcattgatgagaagaaattgcttgatgccaca
aggaagcttgaagggacattaacgggggaggaacaactccgtaatagcaagatgtatgat
ttgctttatgtcagctttgcccatgatttggctccacatatcgtactgtactaccaatat
aatagtaatctacctattcatgaaagacctgcttggccaattgacccaaatgctagtggt
ggaatgaatgggtttctctggctatgcgacagaaatgtgttcagatccagtgtattatcc
cccattgaaggattgcaggatattgatcataaccaagttttgaatattacatattttaat
cctcgtaaacatagtcatatcccagaacctccagctggtgtagtaatgcccaaaaagata
ttaaaagccattgatattaaaccttttcctgtgctatggcatgaagataatggtggtcga
cgacagtttggtagagaaaggccacacgtacctggagcaatagctggccctcaactagga
gaagcagcacatcgtcttgtcaagaactcccttaatataaaatcaaacaatacgtctcat
ggattttcagagcaacttccagggtataatacaatgaacaggctcagaccagctgggccc
tctggttctggaaaatattatggtgaggatacaagtggttattatggacactatcctaat
cagcatggcatgataaataggccgagatatccaatctcttctaatgggggaccaagtgac
agacagaactttaggatgcagcatcatgaacatcagttccacaatgtgagaacagggttt
tctgctttgacaatggaggatggcatgagacctcggttatctgctccaaagacgcctgcg
atgatgtttttgaggcctccaaacacgggatcagcaaacaatatgcaacaacaatttgtg
cagaacataggtcctccgataccacctccaaagtggattaccaaaggaccagatacaaat
ggagtatatgccagacatcaagaagttgggtttgggggatcttatgacaaacagatgaag
aaggtttaccaaatcagaacacgtcaaacccaggatatgccagagtatgggaacagatag
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