Arachis hypogaea (peanut): 114927419
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Entry
114927419 CDS
T07294
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114927419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahf03400
]
114927419
Enzymes [BR:
ahf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114927419
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114927419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
BRCT
PTCB-BRCT
DNA_ligase_IV
T_Ag_DNA_bind
Motif
Other DBs
NCBI-GeneID:
114927419
NCBI-ProteinID:
XP_029152825
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSIVPSHLTQTDVSSIKGDSHIFSNMMFYFVNVPPSHSLESLHKMIAENGGVFSMNLNNS
VTHRVAAESKGFKFEAAKRHGDIIHYSWILDCCSQKKLIPLQPKYFLFLSEVTRKKLQEE
IDEFSDSYYMYIDLGEFKQLLNTINRSEDISTIDHYSKKYCPKDEWSVFIGCSIYFHTAI
PSVKGEWEVLLQLALRRFKVEVLMGGGRVTDKLTCATHLVVLSVPGYDAEFDELQRCFTS
VDRRFLQSKRLHIIKSHWFEDCLDNNKRLPEESYSLRPSVIAESTSENGSVMWIHLPLMF
DIPAQVLENDTLESHFGGDNVQDQNVPSEKENRQRSAKAAHEHSLATVSHENVGPRKRGR
PAGRGVKNVKMAGNKAQRARPRTVRKRAKISEYESDKSDSHDNEPEEQENDTGEASFDIY
NRHLEPQEVEQQANVQVAETEESSEPNRAVHDLRNSSESERMYVPEIKMADRTNDQNSEL
ANEIENRADPMLFDKIPGLATAKKVEDTKHCDLKREASSSSRSSSTILQNLQSLRKKLAT
RTLPMTCSKIGRLGQRLYHSCICI
NT seq
1694 nt
NT seq
+upstream
nt +downstream
nt
atgtccattgttccttctcatttaactcagactgatgtttccagtatcaagggagactct
catatattttcaaatatgatgttttacttcgttaatgtgcctccatctcattctcttgag
agcttgcacaaaatgattgctgagaatgggggagttttctcgatgaacttaaataactct
gtcactcatcgtgtggcggcagagagcaaggggtttaaatttgaagctgcaaaacgtcat
ggtgatatcattcactacagttggatattagattgctgctcacaaaagaagcttatcccc
ttacagccaaagtacttcctcttcctatctgaagtaacaaggaagaagttacaagaagaa
attgacgagttctctgactcttactacatgtatattgatcttggagagttcaaacagctc
ttaaacactattaataggtcagaagatatcagtactattgatcattacagcaaaaaatac
tgcccaaaggatgagtggtctgtctttattggatgctccatatatttccacactgcaata
ccatcagtgaaaggggaatgggaagttctattgcaacttgctttgagaagattcaaggtt
gaagttctcatgggcggtggtagagttactgataaacttacttgtgcaacccatttagtt
gtcttgtcagttccaggatatgatgccgaatttgatgagctacagagatgttttacttca
gtggataggaggtttctccagagcaagaggttgcatataataaaatcccattggtttgaa
gattgtctggacaataacaaaagattaccagaagaaagttacagcttgaggccctctgta
atagcagagtcaacatctgaaaatgggtcagttatgtggatccatttgcctttaatgttt
gatatacctgcacaagtgcttgaaaatgacaccttagagtctcactttggtggagacaat
gtacaagaccagaatgtaccctctgaaaaggaaaatagacagagaagtgcaaaagctgct
catgaacacagtttggccacggtgtcccatgagaatgttggcccaaggaagagaggaaga
cctgcagggagaggtgttaaaaatgttaagatggctggcaacaaagcccaaagagcacgg
ccacgcactgtgagaaagcgtgcgaaaataagcgaatatgaatcagacaaaagtgattct
catgacaatgaaccagaagagcaggagaatgacaccggagaagcaagttttgatatttac
aatagacatttggaacctcaggaggtcgagcaacaggccaatgtccaagttgccgaaaca
gaagaaagttctgaaccaaacagggcagtgcatgatttgaggaatagtagtgagagtgaa
agaatgtatgttccagaaataaaaatggcagataggaccaatgaccaaaacagtgaattg
gctaatgagattgaaaatcgggctgatcccatgttatttgacaagattcccggccttgct
accgccaagaaagttgaggacactaagcattgtgatctaaagagagaggccagcagcagc
agcagaagcagtagcaccatactgcagaacctacaatcactaagaaagaagttagctaca
aggacgttgccaatgacctgctcaaagattggtagactagggcagcgcctctatcattcg
tgtatatgtatata
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