KEGG   Actinoalloteichus hoggarensis: AHOG_20920
Entry
AHOG_20920        CDS       T04975                                 
Symbol
casD3
Name
(GenBank) CRISPR system Cascade subunit CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
ahg  Actinoalloteichus hoggarensis
Brite
KEGG Orthology (KO) [BR:ahg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ahg02048]
    AHOG_20920 (casD3)
Prokaryotic defense system [BR:ahg02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    AHOG_20920 (casD3)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: ASO21801
UniProt: A0A221W807
LinkDB
Position
complement(4938416..4939186)
AA seq 256 aa
MTLSLAVCFDAPMQSWGTRSAYIKRDTAREPTKSGVVGVVASAMGIDRDDRASIAALAEL
RLGVRVDREGLLEVDFHTAQNVPNTEGGGHRTVVSHRYHLSDALFLVVLAGEGPEQEALL
LRAEAALRSPAWPLFFGRKAFVPSRPLLGEGSAEAPSGWGLSERSPAAVLHEHPWLETGV
NRARISARLHGAGDPDPPPPLRAVIDCDATDKNAEIRSDHPLSFARGDRRFASRSFTTLH
IPLTPAMISPGDRPCS
NT seq 771 nt   +upstreamnt  +downstreamnt
gtgacgctctcgcttgcggtgtgcttcgacgcgccgatgcagtcctggggcacgagatcc
gcgtatatcaagcgggacaccgcccgggaaccgacgaagtccggggtggtcggcgtcgtt
gcgtccgcgatggggatcgaccgggacgaccgagcgtcgatcgccgcactggcggagttg
aggctcggcgttcgcgtcgatcgggaaggactactggaagtcgactttcacaccgcacag
aacgttccgaacaccgagggcggcgggcatcgcacggtggtcagccaccgctatcacctg
tccgatgcactgttcctggtggttctggcgggggaggggcccgaacaggaggcgctgttg
ctgcgggccgaggcggcgcttcggtctccggcgtggccgctgttcttcggccgtaaggcc
ttcgtcccgtcccggccgctgctgggcgaaggttcggcggaggctccgtccggctggggc
ctgtcggagcgatcgccggctgcggtcctccacgagcacccgtggctggagaccggcgtc
aaccgcgcccggatcagcgctcgccttcacggtgcaggcgatccggatccgccgcccccg
cttcgagccgtgatcgactgcgacgccaccgacaagaacgccgagatccgctccgaccat
ccactgtccttcgcccggggcgatcgccgtttcgccagccgatccttcacgacgcttcac
atcccgctcacgccagccatgatctcgccgggagaccgcccgtgttcctga

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