KEGG   Actinoalloteichus hoggarensis: AHOG_23955
Entry
AHOG_23955        CDS       T04975                                 
Symbol
ligA
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ahg  Actinoalloteichus hoggarensis
Pathway
ahg03030  DNA replication
ahg03410  Base excision repair
ahg03420  Nucleotide excision repair
ahg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ahg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AHOG_23955 (ligA)
   03410 Base excision repair
    AHOG_23955 (ligA)
   03420 Nucleotide excision repair
    AHOG_23955 (ligA)
   03430 Mismatch repair
    AHOG_23955 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahg03032]
    AHOG_23955 (ligA)
   03400 DNA repair and recombination proteins [BR:ahg03400]
    AHOG_23955 (ligA)
Enzymes [BR:ahg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AHOG_23955 (ligA)
DNA replication proteins [BR:ahg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AHOG_23955 (ligA)
DNA repair and recombination proteins [BR:ahg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AHOG_23955 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AHOG_23955 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     AHOG_23955 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AHOG_23955 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia HHH_5 PTCB-BRCT HHH Zn_ribbon_TFIIB Auto_anti-p27
Other DBs
NCBI-ProteinID: ASO22397
UniProt: A0A221WAS8
LinkDB
Position
complement(5657402..5659840)
AA seq 812 aa
MTSESAEETAASTEAQSVEDVPAQARERHDRLAEEVTGHQFRYYVRDAPTISDGEFDRLL
GELAELERRYPGLATPESPTQRVGGTFSTEFNAVDHLERMLSLDNAFEEEELAAWVDRVE
REVGPDAHYLSELKIDGLAINLLYENGRLIRALTRGDGRTGEDVTLNIRTMDDVPERLHG
TEEFPIPELVEVRGEVFFVLEEFTELNAGLVASGRAPFANPRNAAAGSLRQKDPRVTASR
PLRLICHGLGRRTGFQAERQSEAYAALRAWGLPVSSHTKVLGSLAELRRHLAYWGEHRHD
AEHEIDGVVFKVDEVPLQRRLGTTSRAPRWAIAYKYPPEEATTELRDIQVNVGRTGRVTP
FAVMEPVKVAGSTVAMATLHNGDEVRRKGVLIGDRVVIRKAGDVIPEVLGPVVDARDGTE
REFVMPTHCPECGTELRREKESDVDIRCPNARSCPAQLRERLFHLAGRGAFDIEVLGYEA
ASALLTSEVITDEGDVFELTEESLLQAELFRTKAGELSANGRKLIRNLAAAKEQPLWRVL
VALSIRHVGPTAARALAGEFGSLERIDAADEAELAAADGVGPTIATAVREWFAVDWHREV
VDKWRRAGVRMVDEQYDSIPRTLEGLSIVVTGSLEGFSRDEAKEAVMARGGRSAGSVSKK
TAFVVVGEAPGSKYDKAMQLGVPVLDEAGFRVLLADGPEAAAPLAERPAEAEPEPESGAG
AGTETGTGTGAGPGTGAADGAGADGSADGEPAPPKTKRAGEGRRSRAKRTGTAEGAAEDT
PEESSAADSGTTEAPAAGDMSGSAAHDEEDSA
NT seq 2439 nt   +upstreamnt  +downstreamnt
gtgaccagcgaatcagccgaggagacggccgcctcgaccgaggctcagagcgtcgaggac
gtgcccgcgcaggcgagggaacgacatgatcgcctcgccgaggaggtcacgggacatcag
ttccgctactacgtgcgtgacgcgcccacgatctccgacggcgagttcgaccgcctcctc
ggcgagctcgccgagctggagcggcggtatccgggcctcgcgaccccggagtccccgacc
cagcgggtgggtggcaccttctccaccgagttcaacgccgtcgatcatctggagcgcatg
ctcagcctggacaacgccttcgaggaggaggagttggccgcctgggtcgaccgggtggag
cgtgaggtcggccccgacgcccactacctcagcgaactcaagatcgacggactggccatc
aacctgctctacgagaacggcaggctgatcagggcgttgaccaggggagacggccgcacc
ggcgaagacgtcaccctgaacatccgcaccatggacgacgtgccggagcgcctgcacggc
accgaggagttcccgattcccgaactcgtcgaggtgcgtggcgaggtgttcttcgtgctg
gaggagttcaccgagctgaacgcgggcctggtcgcctcgggacgcgcccccttcgccaat
ccgcgcaacgccgcggcgggctcgctgcgacagaaggacccccgggtgacggcctcccgt
ccgctacgactcatctgccacgggctcggcaggcgcaccggcttccaggcggagcgccag
tccgaggcctacgccgcgttgcgtgcctggggactgcccgtctccagccacacgaaggtc
ctcggctcactcgccgagctgcgaagacatctcgcctactggggcgagcaccggcacgac
gcggagcacgagatcgacggcgtcgtcttcaaggtcgacgaggtgcccctgcaacgcaga
ctgggcaccacctcgcgggcgccgcgctgggcgatcgcctacaagtacccgccggaggag
gccaccaccgagctgcgcgacatccaggtcaacgtgggccgtaccggtcgggtgaccccg
ttcgcggtgatggagccggtgaaggtggcgggctccaccgtggcgatggccaccctgcac
aacggcgacgaggtccgacgcaagggcgtgctcatcggcgaccgggtggtgatccgcaag
gcgggcgacgtcatccccgaggtgctcgggccggtggtggacgccagggacggcaccgaa
cgcgagttcgtgatgcccacgcactgcccggagtgcggcaccgagctgcgtcgggagaag
gagagcgacgtcgacatccgctgtccgaacgcgcggtcctgccccgcgcagcttcgggag
cggctgttccacctggcgggtcggggcgcgttcgacatcgaggtcctcggctacgaggcc
gcgtcggcgctgttgacctcggaggtgatcaccgacgagggcgacgtcttcgagctgacc
gaggagagcctgctgcaggcggagctgttccgcaccaaggcgggcgagctgtcggccaac
ggccgcaagctgatccgcaacctggccgccgcgaaggaacagccgctgtggcgggtgctc
gtggccctgtccatccgccacgtcgggccgacggcggcgcgcgcgctggccggtgagttc
ggctccctggaacggatcgacgccgcggacgaggccgagctggcggcggccgacggcgtc
ggaccgaccatcgcgacggccgtgcgcgagtggttcgccgtcgactggcatcgtgaggtg
gtcgacaagtggcgccgcgcgggcgtccgcatggtggacgagcagtacgactcgattcct
cggacgctggagggcctgtccatcgtcgtgacgggctcgttggagggcttctcccgcgac
gaggccaaggaggccgtgatggcgcgcggcggccgatccgcgggctcggtctccaagaag
acggccttcgtggtcgtcggcgaggcccccggctcgaagtacgacaaggcgatgcagctg
ggcgttcccgtcttggacgaggcgggcttccgggtgctgctggcggacggccctgaggcg
gcggcgccgctggccgagcggcccgccgaggcggagcccgagcccgagtccggggccggg
gctgggaccgagaccgggactgggactggggccgggcctgggactggggcggccgacgga
gccggtgccgacgggtccgcggacggcgagccggcgcccccgaagacgaagcgggcgggc
gagggcagacggtcgcgagcgaagcggacgggcacggccgagggcgctgccgaggacacg
cccgaggagagctccgccgccgactctggtaccaccgaggcaccggcggccggggacatg
tcggggtccgccgcccacgacgaggaggactcggcatga

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