Atlantibacter hermannii: NCTC12129_00504
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Entry
NCTC12129_00504 CDS
T05790
Symbol
acrF_1
Name
(GenBank) multidrug efflux system protein
KO
K18142
multidrug efflux pump
Organism
ahn
Atlantibacter hermannii
Module
ahn_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahn02000
]
NCTC12129_00504 (acrF_1)
01504 Antimicrobial resistance genes [BR:
ahn01504
]
NCTC12129_00504 (acrF_1)
Transporters [BR:
ahn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NCTC12129_00504 (acrF_1)
Antimicrobial resistance genes [BR:
ahn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC12129_00504 (acrF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
VDZ71442
LinkDB
All DBs
Position
1:complement(462273..465380)
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AA seq
1035 aa
AA seq
DB search
MANFFIQRPIFAWVLAILLMIAGGLAIIQLPVAQYPTIAPPAIAVSATYPGADAQTVQDS
VTQVIEQNMNGIDNLMYMSSTSDSSGSVTITLTFESGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGIGVEKSSSSYLLVAGFISSDGSMNQEQLGDYVASTVKDPISRTPGVGDVQLFGA
QFAMRIWLDNNALNNYQLTPVDVVNQLKIQNAQIAAGQLGGTPALPGQQLNASIIAQTRL
KSVKEFENITLRVKQDGSLIRLKDVARVELGGENYNTVSRINGKPAAGLGIKLATGANAL
DTAKAIKEQLAKMQPFFPKGLKVTYPYDTTPFVQISIKEVVKTLFEAIVLVFLVMYLFLQ
NIRATLIPTIAVPVVLLGTFALLSMFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
EEDHLPPKEATSKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKAPEPGKPGKKTGLFTRFNQLFDKSVDHYSDSVSRIVHSTTRY
LVVYVLIVVGMVALFIKLPTSFLPDEDQGVFMTLVQLPAGATQQRTQQVLDEVTDYYLHN
EAKNVESVFTVNGFSFSGQGQNAGVAFISLKPWDERPGEENKAQSVIARATTAFSHISDA
LVFPFNLPAIIELGTATGFDFELIDQANQGHDALTRARNQLLAEAAKRPDVLVRVRPNGL
EDTSQFKIDIDQDKAQALGVALSDINQTLSTALGGNYVNDFIDEGRVKKVYLQSDARFRM
LPADIKTLYVRSKNGEMVPFSAFSSTRWIKGSPRLERYNGLPSMEIQGEAVPGKSTGEAM
AVMESLAAQLPGGFGFDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVVGALLAATLKGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKNLI
EATLESVRMRLRPILMTSLAFILGVMPLVISKGAGSGSQNAVGTGVMGGMLAATLLAIFF
VPVFFVVIRRRFSKN
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttctttattcagcgtcctattttcgcatgggtactggctatcctgttgatg
attgccggcgggctggccatcattcagttgcccgtggcccaatatcctaccatcgcgccg
ccagccattgccgtgtcggctacctaccccggtgcagacgcgcaaaccgttcaggattca
gtgacgcaagttatcgaacagaacatgaacggtattgataacctgatgtatatgtcgtcc
accagtgattcgtctggcagcgtcacgattacgctgacgtttgaatccggtaccgaccct
gatatcgcccaggttcaggtgcaaaataagcttcaactggcgatgccgttgctccctcag
gaagtgcagcagcaaggtatcggcgttgaaaaatcaagcagcagttatttgctggtcgca
ggttttatctcttctgacggcagcatgaaccaggaacaactgggcgattacgttgcttca
acggtgaaagatccgatcagccgtacgccaggcgtaggtgatgtgcagctgttcggcgcg
caattcgcgatgcgcatatggctggataataatgcgttgaataattatcaactcacgccg
gttgatgttgttaaccagttaaagatccagaatgcccagatcgcagcgggtcaattaggc
ggcacgccagcactaccgggccaacagcttaacgcatctatcattgcccaaacgcgtctt
aaaagcgtaaaggaatttgaaaacattacgctacgcgttaaacaggatggctcgcttatc
cgcctcaaagacgttgcgcgagtggaactgggtggagagaactacaataccgtctcaaga
attaacgggaaaccggcggcaggactggggatcaaactggcgacgggcgcaaacgcgctg
gacacggcaaaagcgattaaagagcagttagcgaagatgcagccgttcttcccgaaaggc
ttaaaagtcacctatccctatgatacgacgccgtttgtgcagatctcgattaaagaggtc
gttaagacgctgtttgaagccatcgtgctggtcttcctggtcatgtatctgtttttacag
aacatccgcgcaacgctcatcccgactattgcggttccggttgtgctactcggcaccttc
gcgctgttatccatgtttgggtattcaatcaacacgctcacgatgttcgggatggtgctg
gcgataggtttgctggttgatgatgccatcgtggtagtggagaacgttgaacgcgtcatg
gaagaggatcatcttccgccaaaagaagccaccagcaaatccatggggcaaatacagggc
gcattagtgggtattgcgatggttctttccgccgtctttatccccatggcctttttcggt
ggatccactggcgcaatttaccgacagttttcgataaccattgtttctgcaatggcctta
tcggtgctggtggcgttaattttaacgcccgcgctttgcgcgacgttacttaaagcgcca
gagcccggaaaacctggcaagaaaaccggtctgtttaccagattcaaccagctctttgat
aagagtgtcgaccattacagcgatagcgtaagccggatagttcacagcacaacacgctat
ctcgtggtgtatgtcctcattgttgtcggaatggttgcgttgttcattaagctcccgaca
tcctttcttcctgatgaggatcagggcgtctttatgacgctggtgcaacttcccgctggc
gcaactcaacaacgcacccagcaggttctggatgaagtgaccgattattaccttcataac
gaagcaaaaaacgttgagtctgtctttacggtcaatggctttagctttagcggtcagggg
caaaacgccggcgtcgcgtttatcagtctgaagccctgggatgaacgtcccggcgaggaa
aacaaagcccaatcagtgattgcccgtgcaacaacggccttcagccatatcagcgatgcg
ctggtttttccttttaaccttccggctattatcgaactgggcacggctaccggcttcgac
tttgaacttatcgatcaggcgaaccagggccatgatgcgctcacccgggcgcgtaaccag
ttgctggcagaagcggcgaagcgtccggatgtgctggtgcgcgtccggcctaacggactg
gaagacacctcacagttcaaaatcgatatcgatcaggataaagctcaggcgctgggtgtg
gcgctttccgatatcaatcaaaccttgtctaccgccctgggcggtaactacgtcaacgat
tttattgatgaggggcgcgtcaagaaggtgtatctacagtcagatgccagattccgaatg
ttacctgctgatattaaaacgctttatgttcgcagtaaaaacggcgaaatggtgcctttc
tccgcattctcctccacgcgctggataaaaggttcgccccggcttgagcgctacaacgga
ttgccatcaatggaaatccagggcgaggcggtaccagggaaaagtaccggtgaagcgatg
gccgttatggagtcgttagcggcccagttgcccggcgggtttggctttgactggacaggt
atgtcgtatcaggaaaggctgtctggaaaccaggcgccagcgctttatgccatctcgctg
atcgtggtatttctgtgcctcgccgcgctttatgagagctggtcaattcctttctccgtc
atgttggttgtgccattaggcgtcgtgggggcgctgctcgctgcgacgttgaaaggatta
aataatgacgtttatttccaggtcggtttactcacgactatcgggttatcggcgaaaaac
gcaattctcatcgtcgaatttgccaaggatttgatggataaagaaggcaaaaatctcatc
gaagcgacgcttgagtcggtgcgcatgcgtctgcgcccgatcctgatgacttctctggct
tttatacttggcgtaatgccgttagttatcagcaagggtgcgggtagcggctcgcaaaat
gcagtaggcacaggggtgatgggaggaatgctggcagcaacactactggcaatattcttt
gttcctgttttctttgtggttattcgtcggcgttttagtaaaaattaa
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