Actinomyces howellii: NCTC11636_01902
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Entry
NCTC11636_01902 CDS
T06068
Symbol
pdg
Name
(GenBank) UV-endonuclease
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ahw
Actinomyces howellii
Pathway
ahw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11636_01902 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahw03400
]
NCTC11636_01902 (pdg)
Enzymes [BR:
ahw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11636_01902 (pdg)
DNA repair and recombination proteins [BR:
ahw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11636_01902 (pdg)
Prokaryotic type
NCTC11636_01902 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
VEG29148
UniProt:
A0A448HIA9
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All DBs
Position
1:2239609..2240325
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AA seq
238 aa
AA seq
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MARTRGAASAPAATAAKASKAPEAPKAPEELRRRAAAVDDELSRHYPDARCALVHDGPFQ
LLVATVLSAQTTDARVNTITPELFGRWPDPAALAGADRAELEALLRPLGMQRTRAERLIG
LGAALADRGGQVPSDVETLQTLPGVGRKTANVVLGNAFGVPAITVDTHVGRLSRRLGWTT
ASDPRAVERDIASLWEPWRWTDGCHRLIEHGRAVCRARSPLCEDCALATGLCPRVGVA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggccaggacgaggggcgcggcgagcgcgccggctgcgacggcggccaaggcttccaag
gctccggaggctcccaaggctccggaggagctcaggcggcgggccgccgcggttgacgac
gagctgagccggcactatcccgacgcccgctgcgctctcgtccacgacggccccttccag
ctcctcgtggccacggtcctgtcggcccagacgaccgacgcccgggtcaacacgatcacc
cccgagctgttcgggcggtggcccgatcccgcggcgctggcgggagcggaccgtgccgag
ctcgaggcgctgctgcggccgctggggatgcagcgcacccgggccgagcggctcatcggt
ctgggggccgcgctcgcggaccgcggcggccaggtcccctccgacgtcgagacgctccag
accctgccgggcgtgggacgcaagaccgccaatgtcgtgctcggcaacgccttcggagtc
ccggccatcactgttgacacccatgtcgggcgcctgtcgcgccgcctgggatggacgaca
gcgagcgatccgcgcgccgtcgagcgcgacatcgcctccctgtgggagccgtggcgatgg
accgacggctgccaccgcctcatcgagcacggccgtgccgtgtgccgtgcccgctcccca
ctgtgcgaggactgcgccctggccaccggcctgtgccctcgggtcggcgtggcctga
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