Pseudalgibacter alginicilyticus: APS56_08480
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Entry
APS56_08480 CDS
T04100
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz00300
Lysine biosynthesis
ahz00550
Peptidoglycan biosynthesis
ahz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
APS56_08480
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APS56_08480
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahz01011
]
APS56_08480
Enzymes [BR:
ahz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
APS56_08480
Peptidoglycan biosynthesis and degradation proteins [BR:
ahz01011
]
Precursor biosynthesis
Amino acid ligase
APS56_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CbiA
DUF3440
MobB
P-II
Sulfatase
LpxK
KTI12
SRP54
Motif
Other DBs
NCBI-ProteinID:
ALJ05157
UniProt:
A0A0P0DAS6
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All DBs
Position
complement(2024900..2026363)
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AA seq
487 aa
AA seq
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MNVLKDILYKVPINAVVGNTSVAINAIHFDSRRVVENDMFVAIKGSVVDGHKYIGKALEN
GANTIVCEELPDELNAGITYVEVVCASQALAFMAANYYGTPSENLKLIGVTGTNGKTTIA
TLLCQLFKKAGYKVGLLSTVKIMVDEKEYKATHTTPDSVTINKYLKEMNDEGVEFCFMEV
SSHGIHQNRTEGLHFVGGVFTNLSHDHLDYHETFAEYRDVKKSFFDKLPKEAFAIVNADD
KNGLVMLQNTKARKCTYALKNYANYKAQILENQFSGLLLKVNESEVWTRLIGNFNAYNVL
AIYATAELLGLEKVEILRLISELVSVSGRFQYLISDEKITAIVDYAHTPDALQNVLETIN
SIRTKNETLITVVGCGGDRDKTKRPKMGRIASALSSKVIFTSDNPRSEVPETIIEEIEKG
VEPQNFKKILSIVDRKQAIKTACQLAQPNDIILIAGKGHETYQEIKGERFDFDDYKIVQE
YLKQLEK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtattaaaagacatactttataaagttccaattaacgctgttgttggtaataca
agtgttgctattaatgcgattcattttgactcaaggcgcgttgttgaaaatgacatgttt
gtagcaattaaaggaagtgtagtggatggtcataaatatataggtaaagctttggaaaat
ggtgcgaataccattgtttgtgaagagcttccagacgagttgaatgctgggataacctat
gtggaagttgtatgtgcaagtcaagcattggcttttatggctgcgaattattatggcacg
ccttctgaaaacctgaaactaattggggttactggtacaaatggaaaaacaaccattgct
acattattgtgtcaattgtttaaaaaagctggatataaagtagggttgctttctacggtt
aaaataatggtagatgaaaaagaatataaagctacgcataccactccagattctgttact
attaataagtatttaaaagaaatgaatgatgagggtgtggagttttgctttatggaggtg
agttcgcatggtattcatcagaatagaacggaagggcttcattttgtaggtggtgttttt
acaaatttgtctcacgatcatttagattatcatgaaacctttgcggaatatagagatgta
aaaaaatcattttttgataagttgccaaaagaagcatttgctattgtgaatgcagatgat
aaaaatggcttggtgatgcttcagaatacaaaagcacgaaaatgtacctatgcattaaaa
aattacgctaattataaagcgcagattttagaaaatcagtttagtggattgctattaaaa
gttaatgaaagtgaagtttggacacgtttaattggaaattttaatgcttacaatgtatta
gctatctatgctactgcggagttattagggttagaaaaagtagaaatacttcgattgatt
agtgaattagtaagtgtgagtgggagatttcaatatctaatttctgatgaaaaaataact
gcaattgttgattatgctcatacgccagatgctttgcaaaatgtattagaaaccattaat
agtattcgtactaaaaatgaaacactaattacagtagtaggttgtggaggcgatagagat
aaaactaagcgaccaaaaatgggacgcattgcttcagctttaagttccaaagttattttt
acaagtgataacccaagaagcgaagttcctgaaactattattgaagagattgagaaaggt
gtagagcctcaaaattttaaaaaaatactttcaatagtggatagaaaacaagctattaaa
actgcttgtcaattagctcaacccaatgatattatactcatcgcaggaaaaggtcatgaa
acttatcaagaaattaaaggagagcgttttgattttgatgattataaaatagtacaggag
tatttaaaacaattagaaaaataa
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