Anomalospiza imberbis (cuckoo-finch): 137465178
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Entry
137465178 CDS
T11605
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137465178 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137465178 (C9orf72)
Membrane trafficking [BR:
aib04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
137465178 (C9orf72)
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Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
137465178
NCBI-ProteinID:
XP_068033100
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Position
Z:complement(56330659..56345365)
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AA seq
481 aa
AA seq
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MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEAQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDIVHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaagacagagatctctttgaat
ggcgaatcaccattattagctgccacttttgcttactgggataatattcttggtccccga
gtgcggcacatctgggctccaaagacagaacaggtacttctcagtgatggtgaaataact
tttcttgctaaccacaccctgaatggagaaatacttcggaatgcagaaagtggcgcaata
gatgtgaagttctttgttttggctgaaaaaagagtaatcattgtgtcattaatctttgat
ggaaactggaacggagacagaagcacatatggactatcaattatacttccgcaaagtgaa
cttggtttctacctgccacttcacagggtgtgcgtggataggttaacacatattataagg
aaaggaaggatatggatgcataaggagaggcaagaacatttccagaagattgtcttagaa
ggcacagaaagaatggaggctcagggtcagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaagtcacacagtgttccagaagaaatagat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagttcacacctacagacctgtggttgttctgtagttgtaggaagcagt
gcagaaaaagttaataagattgtgagaacgttatgcctgtttctcacaccatctgagcgg
aagtgttccagactctgtagaagtgagtcctctttcaaatatgagtcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccataccctactacgcatatagatgtggacgtcaatacagtgaagcagatgccccct
tgtcacgaacacatctataaccaacgacgatacatgagatctgagctgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacacagatgagagtttc
acacctgatttaaacgtctttcaagatatcgtgcatagagatacattagtaaaagccttc
ctggatcagatctttcacctgaagcctggtttgtctctaaggagtacttttcttgcgcaa
tttctgctagtccttcacagaaaagccttaactttaataaagtacatagaggatgacacg
caaaaaggcaaaaaaccttttaagtctcttcgtagcttaaagatagatctcgacttgaca
gcagagggcgatcttaacataataatggctttggctgagaagataaaaccaggtctacac
tcctttatctttgggaggccgttctacactagtgtacaagaacgtgacatgctcatgaca
ttttaa
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