Anomalospiza imberbis (cuckoo-finch): 137475630 Help Entry 137475630         CDS       T11605                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism aib  Anomalospiza imberbis (cuckoo-finch) Pathway aib04115   p53 signaling pathway aib04145   Phagocytosis aib04148   Efferocytosis aib04350   TGF-beta signaling pathway aib04510   Focal adhesion aib04512   ECM-receptor interaction aib04518   Integrin signaling aib04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:aib00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     137475630 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     137475630 (THBS1)    04518 Integrin signaling     137475630 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     137475630 (THBS1)    04148 Efferocytosis     137475630 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     137475630 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     137475630 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     137475630 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aib04131]     137475630 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:aib00536]     137475630 (THBS1) Membrane trafficking [BR:aib04131]  Endocytosis   Phagocytosis    Opsonins     137475630 (THBS1) Glycosaminoglycan binding proteins [BR:aib00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137475630 (THBS1) SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  137475630 NCBI-ProteinID:  XP_068049191 LinkDB All DBs Position 6:32265516..32281418 Genome browser AA seq 1177 aa AA seqDB search MGPATALCLLLLVLGGSETKRTAESRNDDNSVFDLFELIGFMRKGAGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS GHVFSLVSNGKAGSLDLSLSVDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQNIFTRDLASSAKLHIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EARGTQVCNKQDCPIDGCLSNPCFAGATCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMSNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNESLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYKGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atggggccagcgactgctctctgtctccttctcctcgtgctcggcggctcagagaccaag cgcactgcagaatccaggaatgatgataacagcgtgttcgatctctttgagctcattggc ttcatgcggaagggagcggggcgccgggcccccggggtgtacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactca aagttccaagacttattagatgccatccatgctgagaagggcttcattctcctggccact ctccggcaagccaagaagagcagaggcacgctgctgtctgtggaacagaaagatggctct ggtcatgtcttcagtctagtatcaaatggcaaggcaggctccctggacctgagcctttct gttgatggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacattgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa atggagaacgctgaactggacatccccatccagaacatcttcactagggacctggccagc agtgccaagctccatattgccaaagggggagtcaatgacaacttccagggtctgctgcag aatgtgcggtttgtgtttggaacaactctggaaactattctgcggaacaaaggctgctcc agctccactagtgcaatcatcactttggacaaccccatcaatggttccagcccagctatc cgcactaactacattggccataaaacaaaggacatccaagcagtctgtggattttcttgt gatgaactaacaaatatgtttgtggaactgcaaggactacggtccatggttacaacactt caagacagagttcgaaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc actcctggagcgtgcattcataatggagtcttgcacaaaaataaagaggagtggactatt gacagctgcactgaatgtacttgccagaactctgccactatatgccggaaagtgtcctgt cctctcatgccttgttccaatgccaccgtgcctgatggggagtgctgccctcggtgctgg cctagcgactatgcagacgatggatggtctccttggtctgaatggacctcgtgttctgtg acctgtggtaatgggattcagcagagaggccgttcctgtgacagtctcaataaccgctgt gaaggctcctctgtacagactcggacttgccaccttcaggagtgtgataagagatttaaa caggatggtggctggagtcactggtcaccatggtcatcatgttctgtcacttgtggcacg ggtatcattactagaattcgtctttgcaactctccagtaccacagctgaatggcaaacct tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcttgcactgtgacatgtggaggaggacttcag aaacgaagccgtctctgcaataatcctgagcctcagtatggtgggaagacttgtgtaggt gaagctagagggactcaggtctgcaacaaacaggactgtccgattgatgggtgtctgtct aatccctgctttgcaggggctacatgcaccagtgcccctgatggttcctggaagtgtggt gcctgtcctgctggctaccacggtgatggtattcactgccaagatattgatgagtgcaaa gaggttcctgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatacagaacct gggtacaactgtctgccttgcccaccacgtttcactggaacacagccatttggccgcagt gttgaggatgccatgagtaacaaacaggtctgcaagccacgtaatccatgcacagatgga acacatgactgcaacaagaacgccaaatgcaattatcttggccactttagtgaccccatg tatcgttgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact gacttggatggatggccaaatgagagcctggtttgtgttgccaatgctacttaccactgt aaaaaagataactgccctaatctgcctaactcagggcaggaagactatgataaggatggg attggtgatgcctgtgacagtgatgatgatgatgatggcattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactacgacagggatgatgttggtgaccgc tgtgacaactgtccctacaatcacaaccctgatcaaacggacactgacaacaatggagaa ggagatgcatgtgcaatagatattgatggagatggggtgcttaatgaaagggacaactgc cagtatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt gataactgtccactggaacacaaccctgaccaggaagacactgattctgatcgcataggt gatcagtgtgacaacaaccaggacatagatgaagatggtcatcaaaataaccttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagacaactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaaaatttcagatgattcctctggatcccaaaggaacatcccaaaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgac cctggccttgcagtaggttttgatgaattcaatgctgtggacttcagtggtaccttcttt atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcagggctattcaggtctctccatcaaagttgtgaattccaccactggtccagga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgatcctcgtcacataggctggaaagatttcactgcatacagatggcgactcagc catagaccaaagaccggctacatcagggttgtaatgtataaaggaaagaaaatcatggca gactcaggaccaatctacgataaaacctatgctggtggtcggctaggattatttgtcttc tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagattcataa

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