Anomalospiza imberbis (cuckoo-finch): 137478910
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Entry
137478910 CDS
T11605
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04514
Cell adhesion molecule (CAM) interaction
aib04517
IgSF CAM signaling
aib04520
Adherens junction
aib04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137478910 (PTPRF)
04517 IgSF CAM signaling
137478910 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137478910 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
137478910 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aib01009
]
137478910 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aib04515
]
137478910 (PTPRF)
Enzymes [BR:
aib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
137478910 (PTPRF)
Protein phosphatases and associated proteins [BR:
aib01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
137478910 (PTPRF)
Cell adhesion molecules [BR:
aib04515
]
Immunoglobulin superfamily
Type II RPTP family
137478910 (PTPRF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Ig_2
Fn3_PBP1
ig
fn3_2
Interfer-bind
Ig_VEGFR-1-like_5th
PTP-SAK
Tc-R-P
DSPc
V-set
Y_phosphatase3
fn3_SORL1
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
137478910
NCBI-ProteinID:
XP_068055167
LinkDB
All DBs
Position
9:20570881..20949613
Genome browser
AA seq
1918 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTV
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGRERSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRD
INSQQDLANITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLN
YQTPGASVPCCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWEN
SNLEVNKPKNRYANVIAYDHSRVILTSTDGVPGSDYINANYIDGYRKQNAYIATQGPLPE
TLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVVLLDTVELATYT
VRTFALYKNGSNEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCS
AGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAAT
CGNTEVPARNLFAHIQKLTQVPPGESVTEMELEFKMLANSKAHTSRFISANLPCNKFKNR
LVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWE
HDSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARD
GQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVF
ITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcagacagcaagccaacctttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
ttcgatgatggatcaggatcagttctgcggatacagcccctgcgtgtccatcgagatgag
gctatctatgagtgcacagccaccaacagtgtgggggagataaacaccagtgccaagtta
acagtgttagaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggagaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtggacactgccaccagcaatggg
cgaatcaagcaactccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agtgaggagtcagaccaaggcaaatacgaatgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccacgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagta
ggtgctccaatgccctatgtgaagtggatggctggtgtggaggaactgaccaaagaagat
gagatgcccgtcggtaggaatgtcctggagctgaataacatcatgcagtctgccaactac
acctgcgtggccatctcttcccttggcatgattgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacaacagctaccagcgtgacc
ctcacctgggattcaggcaactctgaccccatttcatattacgtcatccagtacaagccc
aaatccctggagggccagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtacgagttccgggtcatcgcagtcaacaacattggc
aggggtccccccagtgaattggttgaggcccggacaggagagcaagctccttcaagtcca
cccctcaaagtccaggcacggatgctgagtgccagcaccatgctggtccagtgggagcag
ccggaggagcccaatgggcagatccgagggtaccgcgtgtactacaccaccgacccgcac
ctgcctttgagcatgtggcagaaacacaacactgacgacagccacctcaccaccgtgggc
agcctcatcacaggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
gggcccccctcggacatcatccaggtcaaaacacagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctattgacatggctgcctgcctct
caggaacgcattactaaatatgagctgctctactgggaaggggaggatggcactcagcaa
aaggtggagtttgatccaacctcctcatatgccgtggaaggtctcaaaccagacacattg
tataagttccgtctgggcgcccgatcagagctgggggtaggagtttacactcccacggtc
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccaccaccatccgggtaagttgggtgccaccgcccgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcgttccagctgggagatcaaggacctggagaaatgg
acagaatacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatt
cccgtgcacgtgcgcactgatgaggatgtgcccagtgccccaccgagaaaggtggaggtg
gagtctgtgaattcgactgccatccgggtgagctggaagctgcccatctccaacaagcag
catgggcagatccgcgggtatcaggttacctacgttaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggactcc
gtcgaccatgagacagtcattggaggcctgctgccagaaaccacctactccgtcacagtt
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtctggatgaggaaaaaatgaacacgatagactttgggaagagagaccatcactac
acagtgaccaacctgcacaagggggccacgtacctcttcaagttgtctgccaagaacaga
gccggcccaggagaggagtttgagaaggagatcacaactgccgaagatgtgccaagtggc
ttcccacagaacctgcgtgtggtgggtctcaccacttccaccacagaagttgcttgggac
cccccagttttggcagaaaggaacggcaagatcgtcaactacacagtggtatacagggac
ataaatagccagcaggatctggctaacatcaccaaggacacgagtatcactttgacaaat
ttgaaacctgataccacttacgacatcaaagtgagggcccgcaccaataagggggctggg
ccactcagccccagcatccagtcccggaccatgcctgtagagcaagtgtttgctaagaac
ttccgtgtcaatgccgtcatgaaaacatctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcaatgaagaagctcataagtgacctccagccagacacggactattcttttgtgctg
atgaaccgtgggagcagtgcaggggggctccagcacctcgtctcaatccgcactgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaagtacatacaggaaggaaaattcacg
ctaactcttcccaaagtgcagaccactgtgccagttcggtggtactacatcgtggttgtg
ccagcagaccagagcaccagcaccctgactgctcggtggcggacgcctgatgagatggag
ctggaccagctgctggaggccataagccaggggagtcagagcaggcggcagcgacgccag
gcagacagactcaagccctacattgctgctcaagtggatgtgctgcctgagaccttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcctctgtctcaagacctgagc
tatcgctgcttcgtgctggcctcgctggaggatggggacacgaagagatatgcagccagc
ccctactcggatgagattgtgatggaagtggcatcagcgaagcagcaggatgaaccagag
atgctgtgggtgatgggacccgtcctggctgtgatattaatcatcatcattgtcattgcc
atacttctcttcaaaaggaaaagggcacattccccctcttccaaggatgagcactccatc
ggcctgaaggactcactcttggcccactcatctgacccagtggagatgaggcggctcaac
taccagactccaggtgccagtgtcccctgttgcccgaatatctcaagcatgcgtgaccac
ccccccatccccgtgaccgacctcgctgacaacatcgaccggctcaaggccaacgatggg
ctgaagttctcccaggagtacgagtccattgatcctgggcagcagttcacctgggagaac
tccaacctggaagtgaataaaccaaaaaaccgctatgcaaatgtgatagcctatgaccac
tcccgtgtcatcctgacttccactgatggggtcccaggcagtgattacatcaatgccaat
tacattgatgggtatcggaagcagaacgcctacatcgccacgcagggaccactgccagaa
accctcagcgatttctggaggatggtgtgggaacagagaacagcaactatagtcatgatg
accaggctggaggagaagtccagggtaaagtgtgaccagtactggccgagccggggtaca
gaaacctatgggatgatccaggtggtcctgctggatacagtcgagctggcgacctacacc
gtccgcacctttgcgctgtacaagaatggctccaatgagaagacagagctgagacagttc
cagttcatggcttggcccgatcacggggtcccagaataccccaccccaatcctcgctttc
ctgcgacgggtcaaggcctgtaatccaacagatgctgggcccatggttgtgcattgcagt
gctggcgtgggccgaaccggctgcttcattgtcatcgacgccatgctggagcggatgaag
cacgagaagaccgtggacatctacggccacgtgacatgcatgcgctcccagcgcaactac
atggtgcagacagaggaccagtacatcttcatccatgaggccttgctggaggccgccacg
tgcggcaataccgaggtgcccgcacgcaacctcttcgcccacatccagaagctgacccag
gtgccaccaggcgagagcgttactgaaatggagctggaattcaagatgctggccaattct
aaagcacatacctcacgtttcatcagtgccaacctcccatgcaacaaattcaagaaccgc
ctcgtgaacatcatgccgtatgagctgacaagagtctgcctgcagcccatccggggtgtc
gagggctctgactacatcaatgccagcttcatagatggctacaggcagcagaaggcctac
atcgccacgcagggaccactggccgagaccacggaggatttctggcggatgctctgggag
cacgactccaccattgtggtgatgttgacaaagctgcgtgagatgggccgggagaagtgc
catcagtactggcctgcagagcgctctgcccggtaccagtactttgtggtggaccccatg
gcagagtacaacatgccacagtacatcctccgggagttcaaggtgacggatgccagggac
ggccagtcacggaccatccgccagttccagttcacagactggcctgagcagggagtgcca
aagacaggagagggtttcattgacttcattgggcaggtgcacaagaccaaggagcagttc
gggcaggatgggcccatcacagtgcactgcagtgctggggttgggcgcaccggcgtgttc
atcacactcagcattgtgctggagaggatgcgctacgagggcgtggtggacatgttccag
atggtgaagaccttgcggacacagcggccagccatggtgcagacagaggaccagtaccag
ctgtgctacagagccgcactggagtaccttggcagctttgaccactatgcaacgtaa
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integrated database retrieval system
