Actinoplanes ianthinogenes: Aiant_32270
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Entry
Aiant_32270 CDS
T07429
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03030
DNA replication
aih03410
Base excision repair
aih03420
Nucleotide excision repair
aih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aiant_32270
03410 Base excision repair
Aiant_32270
03420 Nucleotide excision repair
Aiant_32270
03430 Mismatch repair
Aiant_32270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aih03032
]
Aiant_32270
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_32270
Enzymes [BR:
aih01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Aiant_32270
DNA replication proteins [BR:
aih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Aiant_32270
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Aiant_32270
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aiant_32270
MMR (mismatch excision repair)
DNA ligase
Aiant_32270
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Aiant_32270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH_5
Zn_ribbon_TFIIB
Auto_anti-p27
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
BCJ42570
LinkDB
All DBs
Position
complement(3574781..3577069)
Genome browser
AA seq
762 aa
AA seq
DB search
MTSPSAEASARHAELAEEIRDHQYHYYVLDAPTISDGEFDRLLRELEALETEFPELRTPD
SPTQNVGGTFSTDFTTVPHLERMMSLDNVFSLDELDAWAERTVRDAGGPVPFLCELKVDG
LAINLLYEKGKLVRGLTRGDGRSGEDVTPNVRTIREIPERLAGDDVPDLIEVRGEIYFPA
EAFADLNATLVEQGKAPFANPRNAAAGSLRQKDPRVTASRGLRMVVHGIGAREGFSPASQ
SHAYEALRSWGLPTSTRWKLFDDMAGVREFIDYYGEHRHDVEHEIDGVVVKVDAVAIQGR
LGSTSRAPRWAIAFKYPPEEVTTKLLDIAVNVGRTGRVTPYAIVEKVKVAGSEVSQATLH
NAQEVARKGVLIGDTVVLRKAGDVIPEILGPVIDLRPADARAFVMPTECPSCGTPLAPAK
EGDVDIRCPNSESCPGQLLERLATLAGRSVLDIEVLGYKAAKALLDSGVLHNEGDLFTLT
EEDLQRVPFFVNKSGKLSTNAGKMLASLEEAKTRPFARVLVALSIRHVGPTAAEALALEY
GSMEALEAELARTAADPEAVAASAEAAQLAEAAGDDEASDAEALGDGGEAAGAGDGGEAA
GAGDGGPASEAVVAAKRKAKAVDPIAAVDGVGPIIADSLREWFTVPWHREIVRKWRAAGV
RMADERAESGPRPLEGLTVVVTGTLAGFTRDQAAEAVTSRGGKVSGSVSKKTGFVVVGDN
PGSKYDKAISLKVPVLDEAGFTVLLTEGPDAARAVAEVAPEG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcaccgagcgccgaggccagcgcccgacacgcggagctcgccgaggagatccgc
gatcatcagtatcactactacgtgctcgacgcgccgaccatctccgacggtgagttcgac
cggctcctgcgcgagttggaggcgctggagaccgagttccccgagctgcggacgccggac
tccccgacgcagaacgtgggcggcacgttctccacggatttcaccacggtcccgcacctc
gagcggatgatgtcgctggacaacgtcttcagcctcgacgagctcgacgcgtgggccgag
cggacggtccgggacgccggcgggccggtcccgttcctgtgcgagctgaaggtcgacggc
ctggcgatcaacctgctctatgagaaaggcaagctggtccgcggcctgacccgcggtgac
gggcgcagcggtgaggacgtgacgcccaacgtgcggacgatccgtgagatcccggagcgg
ctggccggcgacgacgtgcccgacctgatcgaggtccgcggcgagatctacttcccggcc
gaggcgttcgccgatctcaacgcgacgctcgtcgagcagggcaaggccccgttcgcgaat
ccgcggaacgccgccgccggcagcctccggcagaaggatccccgggtcaccgcgtcccgg
ggcctgcgcatggtggtgcacggcatcggcgcccgcgagggcttcagcccggcctcgcag
tcgcacgcgtacgaggccctgcggtcctggggcctgcccaccagcacccggtggaaactg
ttcgacgacatggccggcgtccgcgagttcatcgactattacggcgagcaccggcacgac
gtcgagcacgagatcgacggcgtggtggtcaaggtggacgccgtggcgatccagggccgg
ctcggctcgaccagccgggcgccgcgctgggccatcgcgttcaagtatccgcccgaggag
gtcaccaccaagctcctcgacatcgcggtgaacgtggggcgcaccggccgcgtcacgccg
tacgcgatcgtggagaaggtgaaggtcgccggttccgaggtgtcgcaggcgaccctgcac
aacgcgcaggaggtggcccgcaaaggcgtgctgatcggcgacaccgtggtgctgcgcaag
gccggtgacgtgatcccggagatcctcgggccggtgatcgacctgcggccggccgacgcc
cgggcgttcgtgatgccgaccgagtgcccgtcctgcggcacgccgctggcgccggccaag
gagggcgacgtcgacatccgctgcccgaacagcgagtcctgcccgggtcaactgctcgag
cgcctggccacgctggccggccggagcgtgctggacatcgaggtgctgggttacaaggcg
gcgaaagcgctgctcgactccggggtgctgcacaacgagggcgacctgttcacgctgacc
gaggaggacctgcagcgggttccgttcttcgtcaacaagagcgggaaactcagcaccaac
gccggcaagatgctcgcctcgctggaggaggcgaagacgcgcccgttcgcgcgggtgctg
gtggcgctgtcgatccggcacgtgggaccgacggcggccgaggcgctggcgctggagtac
gggtcgatggaggcgctggaggcggagctggcgcgcacggccgctgacccggaggcggtg
gccgcctcggcggaggccgcccagctggcggaggcggcgggggacgacgaggcgtcggat
gcggaggccttgggggacggcggcgaggcggcgggtgccggggacggcggcgaggcggcg
ggtgccggggacggcgggccggcttcggaggccgtggtggcggcgaagcggaaggccaag
gcggtcgatccgatcgcggcggtggacggggtcgggccgatcatcgcggacagcctgcgg
gagtggttcaccgtgccgtggcaccgggagatcgttcgcaagtggcgtgcggccggcgtg
cggatggccgacgagcgggcggagagcggcccgcgcccgctggagggcctgaccgtggtg
gtcaccggcaccctggccggcttcacccgggaccaggcggccgaggcggtcacctcccgt
ggtggcaaggtgagcggctcggtctcgaagaagaccggtttcgtggtggtcggcgacaac
ccgggcagcaagtacgacaaggcgatcagcctcaaggtgccggtcctcgacgaggccggc
ttcaccgtcctgctcaccgagggcccggacgcggcccgggcggtcgcggaggtggcgccg
gaagggtga
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