Actinoplanes ianthinogenes: Aiant_77540
Help
Entry
Aiant_77540 CDS
T07429
Symbol
ligA2
Name
(GenBank) DNA ligase 2
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03030
DNA replication
aih03410
Base excision repair
aih03420
Nucleotide excision repair
aih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aiant_77540 (ligA2)
03410 Base excision repair
Aiant_77540 (ligA2)
03420 Nucleotide excision repair
Aiant_77540 (ligA2)
03430 Mismatch repair
Aiant_77540 (ligA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aih03032
]
Aiant_77540 (ligA2)
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_77540 (ligA2)
Enzymes [BR:
aih01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Aiant_77540 (ligA2)
DNA replication proteins [BR:
aih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Aiant_77540 (ligA2)
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Aiant_77540 (ligA2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aiant_77540 (ligA2)
MMR (mismatch excision repair)
DNA ligase
Aiant_77540 (ligA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Aiant_77540 (ligA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
PTCB-BRCT
HHH
RNA_ligase
UPF0758_N
OrfB_Zn_ribbon
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
BCJ47097
LinkDB
All DBs
Position
complement(8512801..8514909)
Genome browser
AA seq
702 aa
AA seq
DB search
MPTEPEIAPVVDAAHAAPFGTADDYRAATERIRGAAAAYYEGTDLAMDDATYDALLARVT
ATEQAQPGWVVAGSPAQVVAAGGGVVGDVEHSTPMLSLANVFDEEELRAWAARLDRVIGR
PAAGYTVEPKIDGMAIAARYVDGRLVQVATRGDGRAGEDVTAQARSVAGLPAELTRPVTV
EVRGEVFMTDADFAEANELRTAHGGAPFANPRNAAAGTLRAQDRAYLAPLSFLAYAVHDL
PGGEGLTHSAAMAAIAELGVSTTGGSAAGMAVCTTVDELVAAIASLGALRDKLGFDIDGV
VIKADSPADRDAAGSSSRAPRWAIAYKFPADTRTSKLLGIDVQVGRTGVITPVAVIQAVQ
VGGVTVTSATLHNFDDLVRRDVRVGDTVFVRRAGEVIPEITGAKLDERPADAVPFAAPEV
CPRCGGEIDRSQKRWRCTQGRACGATESLAYFAARDSMDIEGLGDKVIRALVAAGMVTDP
ADLYTLDLDAVAQLERMGRTSATKLLANIEGSKKQPLSRVLTGLGVRMTGRSMSRRLARH
FGSMDALCAATVEQLQEVEAVGPERAATIAAELADLAPVIAKLTERGINMVEPGVTPYAE
RSTVVEGAHLPLQKPDGSPMTVVVTGSVPGLTRTEGNEAVERLGGKSSGSVSKRTDLVVV
GDGAGSKAAKAEELGLRIMPSDRFAALLAADDAGESPALDDF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgagcccgagatcgcccccgtcgtcgacgccgcgcacgccgcgccgttcggc
accgctgacgactatcgcgcggcgacagagcggatccggggcgccgccgcggcgtattac
gagggcaccgacctcgccatggacgacgcgacctacgacgcgttgctggcccgggtcacc
gcgaccgagcaggcgcagcccggctgggtggtggccggctcccccgcccaggtggtcgcg
gccggcggcggcgtggtcggcgacgtcgagcacagcaccccgatgctgagcctggccaac
gtgttcgacgaggaggagctgcgcgcctgggccgcccgcctggaccgggtgatcggccgc
cccgccgccggttacacggtcgagcccaagattgacggcatggcgatcgccgcgcgttat
gtggacggccgcctcgtgcaggtcgccacccgtggcgacggccgcgccggggaggacgtg
accgcgcaggcccggtcggtcgccggtctgcccgccgagctgaccaggccggtgacggtc
gaggtccgcggtgaggtcttcatgaccgacgccgacttcgccgaggccaacgagctgcgc
acggcgcacggcggcgcaccgttcgccaacccgcgcaacgccgcggccggcacgctccgc
gcgcaggaccgggcctatctggccccgctctccttcttggcgtacgcggttcacgacctg
cccggcggcgagggcctcacgcacagcgccgcgatggccgcgatcgccgagctgggggtg
tccaccaccggcgggtcggcggccggcatggcggtgtgcacgaccgtggacgagctggtc
gccgcgatcgcctcgctcggcgcgctgcgcgacaagctcggcttcgacatcgacggcgtg
gtgatcaaggcggactcccccgccgaccgggacgccgccgggtcgtccagccgggcgccg
cgctgggccatcgcctacaagttccccgccgacacccgcaccagcaagctgctcggcatc
gacgtgcaggtcgggcggaccggggtgatcacgccggtcgcggtgatccaggccgtgcag
gtcggcggcgtgaccgtcacgtcggcgaccctgcacaacttcgacgacctggtgcgccgc
gacgtgcgggtcggcgacaccgtcttcgtccgccgcgccggcgaggtgatcccggagatc
accggggccaagctcgacgagcgcccggcggacgcggtgccgttcgcggcgcccgaggtc
tgcccgcgctgcggcggcgagatcgaccgctcgcagaaacgctggcgctgcacccagggc
cgggcctgcggcgccaccgagtccctggcgtatttcgcggcgcgcgactcgatggacatc
gagggcctcggcgacaaggtgatccgcgccctggtcgcggccggcatggtcaccgacccg
gccgacctctacaccctggacctggacgcggtcgcccagctggagcggatgggccgcacc
tcggcgacgaaactcctggcgaacatcgagggttccaagaagcagccgctgtcgcgcgtg
ctgaccggcctcggcgtccggatgaccggccggtcgatgtcccggcggctggcccggcac
ttcgggtcgatggacgcactgtgcgccgcgaccgtcgagcagttgcaggaggtggaggcg
gtcggcccggagcgggccgcgacgatcgccgccgagctggccgacctggccccggtgatc
gccaagctgaccgagcgcgggatcaatatggtcgagcccggcgtgacgccctatgcggaa
cgctccactgtcgtcgagggcgcgcacctcccgctgcagaaaccggacggttccccgatg
accgtggtggtcaccggctcggtcccgggcctgacccgcaccgagggcaacgaggccgtg
gagcggctgggcggcaagtcgtccggctcggtctccaagcgcaccgacctggtcgtggtc
ggcgacggcgccggctccaaggccgccaaggcggaggagctcggcctgcgcatcatgccg
tcggaccgcttcgcggccctgctggccgctgacgacgccggcgagtcccccgccctcgac
gacttctag
DBGET
integrated database retrieval system
