Arachis ipaensis: 107614449
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Entry
107614449 CDS
T04301
Name
(RefSeq) DNA repair protein RAD16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107614449
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
107614449
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107614449
NCBI-ProteinID:
XP_016172141
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Position
B08:complement(6674322..6683252)
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AA seq
834 aa
AA seq
DB search
MVLHPRPRRSNGNDQQPVAEADGRGTSVNYADIHTISSDSDSDSDSDSIVYSNSSYEGLL
DNFNQEPGSSSSSCDTSDYYEHGKRQKPKFSNARSSDVKNRGPNDVDRVVDNAKLLWQVW
ENNQERWIDENLSEDADLDNQNEVLTETAEASSDLTMPLLRYQKEWLAWALKQENSDTRG
GILADEMGMGKTIQAIALVLAKRELMQSSSAPAEPILSHSPSLSGILPAVKGTLVICPVV
AVTQWVNEIDRFTIEGSTKVLVYHGAGRGKSIEQFLDYDFVITTYSTVESEYRKFMMPPK
EKQSRQVKKKTEVTRGMDKEGVSKMSCSEKKLSMDAEDANATHRGMSLLHAVKWLRIILD
EAHYIKSRHSNTAKAVLALESSYKWALSGTPIQNRVGELYSLVRFLQITPYSFYLCKDCD
CRTLDHSSIQCPDCSHSSVRHFSWWNKYVSTPIQSSLSSYGRGKRAMILLKHKVLKNILL
RRTKIGRAADLALPPRIVSLRRDCLDIKEQDYYESLYNESQAQFNTYVESNTLMNNYAHI
FDLLTRLRQAVDHPYLVVYSQAAARQGGHVASNATAEQACGLCREPVEDPVVTSCEHRFC
KTCFIDFSTALGQVSCPSCSQLPTVDLTSHKDVGYQANKTTIKGSRSSSILDRIQLENFQ
TSTKIEALREEIRSMVERDGSAKGIVFSQFTSFLDLINFSLNKSGVSCVQLNGNMTMSAR
DAAIKRFTNDPDCRIFLTSLKAGGVALNLTVASHVFLMDPWWNPAAERQAQDRIHRIGQF
KPIRIVRFIIENTVEERILNLQQKKELVFEGIIGGSSDALGKLTEGDLKFLFGT
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcatcctcgtccacgccgttccaatgggaacgaccagcagcctgtagctgaa
gctgatggccgaggcaccagtgttaactatgcagatattcacaccatatcttctgattct
gattctgattctgattctgattctattgtatattcaaattctagttacgaaggattgcta
gataacttcaatcaagaaccagggtcaagtagtagcagttgtgacacttctgattattat
gagcatggaaaaaggcaaaagccaaagttcagtaatgcaagaagttctgacgtgaaaaat
agaggaccaaatgatgttgatagagtggtggacaatgcaaagctgctatggcaagtatgg
gaaaataaccaagaaagatggattgatgagaatttatcggaagatgctgacttagataat
cagaatgaagtattgacagaaactgctgaggcatcttctgatctgactatgcctttactt
aggtaccaaaaggaatggttagcctgggctttgaaacaggaaaattctgatactagaggt
ggcatccttgcagatgaaatgggaatgggaaagactattcaagcaatagcacttgtcctt
gccaaacgtgaattgatgcaaagtagttctgcaccagctgaacccatactatcgcattca
ccttctttatctggaatcttgcctgcggtcaaaggaacacttgtcatttgtcctgttgtc
gctgttactcagtgggttaatgagattgatcggtttaccatcgaaggaagcaccaaggtg
ctcgtttatcatggggcagggagagggaagagtattgaacagttcttggattatgatttt
gtgataactacgtactctactgttgagtctgagtacaggaagtttatgatgcctcctaag
gaaaaacaatcaaggcaagttaagaagaaaacagaagtcactagagggatggacaaagaa
ggtgtgagtaagatgtcttgtagtgaaaagaaactgagcatggacgcagaagatgcaaat
gctacacacaggggtatgtcacttcttcatgctgttaaatggctgcggattatattggac
gaggctcactacataaagtccagacatagtaacacagcaaaagcagttcttgctttagag
tcttcctacaaatgggctttaagtggcactcccattcagaaccgtgttggagagctgtac
tctcttgtacggttcctgcaaataactccgtattcattttacttgtgcaaggactgtgat
tgcaggacccttgatcacagctccatacaatgtccagactgcagccacagttcagttaga
catttctcttggtggaataaatatgtttccacaccaattcaatcctctctaagtagctat
gggcggggtaaaagagctatgatcttgcttaaacacaaagttctgaagaacatactacta
aggcgcactaaaataggcagggctgctgatcttgcacttcctcctagaattgtctcactg
agaagggattgtctggatataaaagagcaagactattatgagtcattatacaatgaaagt
caggcacaatttaatacgtatgtcgaatctaatacactgatgaataattatgctcatata
tttgatcttctcacacggctgcgtcaggctgttgatcatccataccttgtggtatattct
caagctgcggcacgacaaggtggccatgtggctagtaatgctactgctgaacaagcatgt
ggcctttgtcgtgaaccagtggaagatcctgtggttacctcttgtgagcatagattttgc
aagacatgctttatagatttctctactgctttgggacaagtatcatgcccttcatgctct
caattacctactgttgatttaacttcccacaaggatgttgggtaccaggcaaataaaacc
actattaagggatccagatcctcaagcattttagacagaattcagcttgagaactttcag
acaagtactaaaatagaggctttgcgagaagaaataagatctatggtcgaaagggatggt
tctgccaaagggattgtttttagtcagttcacatcattcttggatctaataaacttctct
ttgaataagtctggggtatcttgtgttcaattgaatggaaatatgacaatgagtgcccga
gatgctgccattaagaggtttaccaatgatccagactgcaggatttttctcacgagcctg
aaggccggaggcgttgcactcaatttgactgtagcatcacatgttttccttatggatcct
tggtggaacccagctgcggagcgtcaggctcaagacagaattcaccgaataggacaattt
aaacctataagaattgtgagatttataattgagaacactgttgaggagaggattttgaat
ctgcaacagaagaaggaactagtgtttgaagggattataggtggctcttctgatgctctg
ggaaaactgacggagggagacttgaaatttctatttggtacatag
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