Arachis ipaensis: 107618761
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Entry
107618761 CDS
T04301
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107618761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107618761
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107618761
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
Arf
AAA_23
AAA_30
Zeta_toxin
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
107618761
NCBI-ProteinID:
XP_016176392
LinkDB
All DBs
Position
B09:complement(28369864..28373564)
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AA seq
330 aa
AA seq
DB search
MGVVCGNSEPTIEIKDLKFTYPGIDGHPPPGSAPLIQDFSLSLSSGDRCLLVGSNGAGKT
TILKILGGKHMVEPGMVRVLGRSAFHDTNLTSSGDLCYLGGEWRRDVAFAGYEVAIQMDV
SAEKMIFGVAGTDPERRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDE
ITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPID
KVKETSKLSLMRTVESWLRKERDEDRRKRKERKAAGLPEFEKQVDGSRVAGDPARAAVRV
INNGWAAGRLTSTVAGEENFMLSSNRVLRQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgtttgcgggaattcagaaccgacgattgagattaaagatctgaaattcacg
taccccggcatcgacggtcaccctccgccgggctccgctcctctcattcaggacttctct
ctctcactctcttccggcgatcgatgcctccttgttggatccaatggcgctgggaagacg
acgattctcaagatattgggagggaagcacatggtcgaaccgggaatggttcgtgtgctt
ggaagatcggcttttcatgacaccaatttgacgtcctctggtgatctctgttatcttggt
ggcgagtggaggcgagatgttgctttcgcgggttatgaggttgcaatacaaatggatgtt
tctgctgaaaagatgatatttggtgtggctgggactgatcctgaaagaagagcagagcta
atcaaggtattggatatagatctctcttggagattgcataaagtatctgatggtcaaaga
agaagagttcaaatttgtatgggtctcctcaaaccattcaaggttcttctactcgatgag
ataacagtcgaccttgatgttctagcaagagctgaccttttgaagttcctaagaaaggaa
tgtgaagagaggggtgctactattatatatgcaacacatatatttgacggtcttgaggat
tggccaactaatatagtttatgtagcgcatggaaagctgcaattagccatgcctattgat
aaagtcaaggaaactagcaaactgtcattaatgagaacagttgaatcttggctgaggaaa
gaacgcgatgaagatagaaggaaaagaaaagagaggaaggcagctggtcttcctgaattt
gaaaagcaagttgatggaagccgcgtagcaggggatccagctcgtgctgctgttcgagta
atcaacaatggctgggcagcagggcgattgacgtctacggttgctggtgaggagaacttt
atgctcagctcaaacagagtattgaggcagtag
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