Arachis ipaensis: 107625021
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Entry
107625021 CDS
T04301
Name
(RefSeq) ABC transporter I family member 21
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107625021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107625021
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107625021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
nSTAND3
ORC-CDC6-like
AAA_28
AAA
NACHT
AAA_23
AAA_15
Arf
AAA_18
G-alpha
PduV-EutP
AAA_5
AAA_24
AAA_30
AAA_22
SRP54
Motif
Other DBs
NCBI-GeneID:
107625021
NCBI-ProteinID:
XP_016183024
LinkDB
All DBs
Position
B02:18487578..18492136
Genome browser
AA seq
290 aa
AA seq
DB search
MAVEEEKEGSMGIRVHGMQFSYEWQSPLFVDFKLNVSPGSRCLLLGANGSGKTTLLKILA
GKHMVGGRDVVRVLNGSAFHDTHLVCSGDLAYLGGSWSKTIGSAGDVPLQGDFSAEHMIF
GVEGADPDRRNKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPFKVLLLDEVTVDLDV
VTRMDLLEFFKEECEQRQATIVYATHIFDGLETWATHLAYIQAGELRKAEKLSDVDELKS
SANLLSVVETWLRAETRNEKKKPVQNTAQTQKTSVASSPFFSSRHMAYYR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagaagaagaaaaggaaggttctatgggaatcagagtgcatggaatgcaattc
tcttacgaatggcaatcgcctctgttcgttgatttcaagctcaacgtctctcctggatct
cgatgccttctccttggtgccaatggatccgggaagactacattgctgaagattttagct
ggaaagcacatggttggaggaagagatgttgtgcgggtgttgaatggttctgctttccat
gacactcatctagtatgtagtggtgatcttgcttacttggggggatcatggagtaaaacc
attggttctgctggagatgttccacttcaaggagacttttctgctgaacatatgatcttt
ggagttgagggtgctgatccggacaggagaaataagttgattgaactgcttgatatagat
cttcagtggcgaatgcataaggtatctgatgggcagcggcgtagagtgcaaatatgtctt
ggtctgcttcatccatttaaggttctcttgctggatgaagttaccgttgacttggatgtc
gttaccaggatggatttgttagagttcttcaaggaagaatgtgaacagagacaagctaca
attgtatatgcaactcacatttttgatggactggagacatgggcaactcatttggcatac
atacaagccggtgagctgaggaaagcagaaaaattatccgatgtcgacgagttgaagtct
tcagccaatctgctatctgttgttgaaacttggctccgtgccgaaacaaggaacgaaaag
aagaagcctgttcaaaatactgcccaaacacaaaagacttctgttgctagttctccattc
ttttcatcaaggcacatggcatattatcgatag
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