Argopecten irradians (bay scallop): 138304846
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Entry
138304846 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr00970
Aminoacyl-tRNA biosynthesis
Brite
Enzymes [BR:
airr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
138304846
Amino acid related enzymes [BR:
airr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138304846
Transfer RNA biogenesis [BR:
airr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
138304846
Prokaryotic type
Other AARSs
138304846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
138304846
NCBI-ProteinID:
XP_069101274
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All DBs
Position
12:complement(36612553..36654740)
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AA seq
1276 aa
AA seq
DB search
MSMSKCQPVAEHINFPKMEESVLKHWKDIDAFKTSLKQSAKKPRYTFYDGPPFATGLPHY
GHILAGTIKDVVTRYAHQTGYHVERRFGWDCHGLPVEYEIDKTLGITGPEDVMKMGIEKY
NAECRKIVMRYSQDWQDIVTRLGRWIDFENDYKTMYPWFMESIWFVFKELYKKGFVYKGA
KVMPYSTMCNTPLSNFESGQNYKDVIDPAVIVSFPLVESPEVNVLAWTTTPWTLPSNISL
CVNANMDYIKVKDSATNNIYILMEARLQALYKSEEEYTVLEKFKGKAIVGKKYQPLFNYF
EYMGKEKGAFRILCDDYVSAESGTGIVHQAPYFGEDDYRVCLANGIISKDSAMICPVDAS
GRFTDEVVDFKGMHVKDADKHIMKTLKANKRLVHQGTITHSYPFCWRSETPLIYKAVPSW
FVRVEQATQRLLNNNSKTYWVPDFVKEKRFANWLRDARDWAISRNRYWGTPIPLWISDDG
EEVVCVGSIEELHQLSGVKVDDLHRETVDKITIPSKFGKGQLKRTPEVFDCWFESGSMPY
AQVHYPFERKKDFDDNFPADFIAEGVDQTRGWFYTLLVLSTLLFDKPPFKNLIVNGLVLA
ADKQKMSKRKKNYPDPIEVVNKYGADALRLYLCNSPAVRAENLCFREEGVERVLKDVFLP
WYNAYRFFMQNAERYEREEGGVFLYNPNNITRPTNYMDRWMLSSTQSLLKFVKKEMSEYH
LYTVMPVMVKFVGQLTNWYVRMNRKRLKGDGGAADCRMALETLFGVLHSMIRVMSPLIPF
ITEHMYQNLQHLLDPAYTDKLDIRSVHFLMIPDPREDLIDTQMETAVSRMQSVIEIGRLI
RDRNTLPMKYPLKEVVAINGDEEALHDISFLSEYIKEELNVKNITTTSNKNKYGAQLVAE
PDFKSLAGKLKGDVKKIYGAIKSLRNAQLENFQETGQITVEGNVLEEGDMRLRYKFDAKD
SSTPNCYDAHGNKDVLVLLDVTPDQSMLDEGIAREVINRMQRLRKKGGIVPSDDITVYYQ
ASDSLTAIINNFSDFIFSTIKQPVCPYPVPAGSKVVVEESTSVKKDELMLTIVSRSGDRP
KSMAVPTVQPAAVVKGVTPTCSYINVQLCGLAPQEGVSGNHATVLLENPKGKAMGSRQVL
VDQVKSVFGVRGIKLEVYKDSNMSEVLPANVNVTSLAGKTLYVAAKCQTGSAPASSPMCH
FANVEMNGVKGTLLLENPKGVTLSVDQLRSQVSAVFGLDGQKIELSSTKDGKKKLTNENC
KDSLSLHSSTVYAVKL
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtccaaatgtcagccggtggctgagcacatcaatttccccaagatggaggaa
tctgtgcttaagcattggaaagacatagatgctttcaaaacatcactgaaacagtcagcc
aaaaaaccaaggtacaccttctatgatggtccaccatttgcgacaggccttccccattat
ggtcacattctggccggtactatcaaggatgtggtgacacgttatgcccaccagacaggc
taccatgtagagaggagatttggctgggattgtcatggtcttcctgtggagtatgagata
gacaagacactgggtatcactggtccggaggatgtcatgaagatgggaatagaaaagtac
aacgctgagtgtcgtaagattgtcatgaggtactcccaggactggcaggacattgtgacc
agactaggacggtggatagactttgagaatgactacaaaactatgtacccttggtttatg
gagtccatctggtttgtgttcaaggaactctacaagaaaggctttgtttacaagggagca
aaggtgatgccctattccaccatgtgtaacactccactcagtaactttgaaagtggacag
aactacaaggatgtcatagatcctgctgtgattgtgagtttccctctggttgagtcccct
gaagtgaatgtcctagcatggaccaccacaccatggacactacccagcaacatttctctc
tgtgtcaatgctaacatggactacatcaaggtcaaagacagtgccacaaacaatatttac
attttaatggaggctcgacttcaggcgttgtacaaatcagaagaggagtatactgtgctg
gaaaaattcaaaggcaaagcaatagtaggaaagaaataccagcccttgtttaattacttc
gaatatatggggaaggagaaaggtgcattccgaatcctttgtgatgattatgtcagtgct
gaaagtggtacaggaatcgtacaccaggctccatacttcggagaggatgattaccgagtg
tgtttagctaatggaataatcagtaaagacagcgccatgatctgtcctgtcgacgcaagt
gggaggttcacagacgaagtcgttgatttcaaaggaatgcatgtcaaggacgctgataag
cacatcatgaagacattgaaggccaacaagcgcctggtacaccaagggaccatcacccat
agctaccccttttgttggagatctgagacacccctgatctataaagctgttcctagctgg
tttgtccgcgttgaacaggcaacacagagattgttaaacaacaactcaaaaacgtactgg
gtgccagactttgttaaagagaagagatttgccaactggctgagagatgcccgagattgg
gccatctctaggaatcgttactgggggacccctataccattgtggatcagtgacgacgga
gaggaggttgtctgtgttgggtctatagaggagcttcatcaactcagtggggtaaaagtg
gacgatctgcacagagaaacggtagataaaatcaccattccatctaagtttgggaaggga
caactaaagaggaccccagaggtgtttgactgttggtttgagagtggcagcatgccctac
gcacaggttcactacccgtttgagaggaaaaaagactttgatgataatttcccagcagat
tttatagcagaaggtgtggaccagacgaggggttggttctacactctccttgtcctctcc
actctcctgtttgataagcctccattcaagaatctgatcgtgaatggcctagttttggca
gcagacaaacagaagatgagtaagaggaagaagaactaccccgatcctatagaagttgtc
aacaaatacggtgctgatgccctcaggttgtacctgtgtaactcacctgctgtacgggct
gagaacttgtgtttccgagaagaaggggtagaacgagtcctcaaagatgttttcttgcca
tggtacaatgcctacagatttttcatgcagaatgcagaaagatacgagagggaagaggga
ggtgtgtttttgtataaccctaacaatataacccgtcccacaaactacatggaccgctgg
atgttgtcctcaacacagtctctactcaaatttgtcaaaaaggaaatgtcagagtaccac
ctgtacactgtgatgccagtgatggtgaagtttgttggtcagctgaccaactggtatgtg
aggatgaacaggaagaggctaaagggagacggaggagcagcagattgtcggatggccttg
gagacactgtttggtgttctacactccatgatccgagtcatgtctcctctgatcccgttc
atcactgaacacatgtaccagaacctacaacacttactggacccagcctacacagacaaa
ctggacatccgtagtgtccacttcctcatgatccctgacccaagagaggatctaatagac
acccagatggagacagcagtgtcccgcatgcagtcagttatagagattggccgtctgatc
cgtgataggaatactctcccaatgaagtaccccctgaaggaagtggtggccattaacggt
gatgaggaggctctccacgacatctcattcctcagtgaatacatcaaggaggagttaaat
gtaaaaaatatcacgaccaccagtaacaagaataaatacggagcacagctagtagcagaa
cctgacttcaaatctctcgcaggaaaactcaaaggggatgtcaaaaaaatctatggtgca
atcaaatcacttagaaatgctcaactagagaacttccaggagaccggtcagatcacagtg
gaaggcaatgtactggaggagggagatatgcgactccgatataaatttgatgcaaaggat
agctcaactccgaactgctatgacgctcacggaaacaaagatgtgttggtgttactggat
gtgactccagaccagagtatgctggacgaaggcatcgctcgcgaggtcatcaacaggatg
cagaggcttcgtaaaaagggtggaatagtgccttctgatgacatcacagtttactaccag
gcaagtgacagtctcaccgccatcatcaacaacttctccgacttcatctttagtaccatc
aaacaaccagtctgtccctaccccgtaccagcagggtcaaaggttgtcgttgaagagagc
acatcggtgaagaaagacgagttgatgctgaccatcgtgtccagatcaggagaccgtcct
aagagcatggccgtgccgacagtacagccagcagcggtagtaaagggggtcacgcccaca
tgtagttacatcaatgtacagctgtgtggcctagccccccaggagggcgtgtcaggaaac
catgctacagtcctactggaaaacccaaagggcaaagccatgggtagcagacaagtcctg
gtcgaccaggtgaagtctgtgtttggtgtgcgtggtattaagttagaagtttacaaggac
agtaatatgtcagaggttctgcctgccaacgttaacgtcacgtcactggccggtaaaact
ctgtatgtagcagctaagtgtcagacaggctccgcgccagcatcatcaccaatgtgccat
ttcgctaatgtggaaatgaatggtgtgaaggggaccctgcttctagagaatcctaaggga
gtcacattgtcagtggatcagttaagatctcaggtatcagctgtgtttggccttgacggt
cagaaaattgaactgtcctcaacaaaagacggaaagaaaaagttaacgaatgaaaattgt
aaggactctctgtcactacactcgagtacagtgtacgctgtcaaattatga
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