Argopecten irradians (bay scallop): 138307697
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Entry
138307697 CDS
T10542
Name
(RefSeq) F-box and WD repeat domain-containing 11-A-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138307697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138307697
04121 Ubiquitin system [BR:
airr04121
]
138307697
Membrane trafficking [BR:
airr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
138307697
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138307697
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
DSE1_N
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
F-box-like
WD40_like
WDR90_beta-prop_4th
CFAP251_N
F-box
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR19_1st
DUF4508
WD40_CFAP43
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
138307697
NCBI-ProteinID:
XP_069104637
LinkDB
All DBs
Position
1
Genome browser
AA seq
877 aa
AA seq
DB search
MNAVAERPPLAAAAGRKGHLSPQREGKGVRRRPEGEDDERRLLDWRGHGGRHPTQSSVEF
DRQLDKISMWMENWNHSQRCQLMENLLRRSGHNQFQFLYTVMQPNVHRDFIYNAKSHFPG
MDFKSVSTPAMREAQRRDREKQNEKRRKLKLYRQDNYFREKSAHLKDDSQVTHLAEEQNE
MGLRLPQIPSGAKINSDKGTDLSVLNFKSKHKKKGASFPKIITSNTLPKNHKNKPKGVVS
VVNSDDMSSVNASAPVLRFIDMPIRRHIQDEGNMRYLGSSLSSLPVSTRFTLESSVSFIN
EDQNQSQKKKTKTLLDEEAWSVIHWYLEEWSDVRKNEFLHKFLLKLDPRQHYFISSFLSM
RQYRDFLTMLPEHISLKILNYMTPEKILKCSMVSKAWHALANSNKLWGWKCEEVELLVPI
PSNPCWKHIYRDNMHLKMNWSNGSCRTLDLKGHTDTVEAVTFNHRLFASGSQDKTIRIWD
IKSGRPLQVLKGHEKGVWCLNLFTETLLVSGSYDGTIKVWNLRTGSTVRTLLAHDGPVWA
MVRHNNILVTASQDKTAKIWDISRCYLIHNLYGHTEAVFAVDLSEDGALTITGSADRTLR
IWDTVTGEQKKMIWVSQSTSIMAVSYSKGYVACSYGETICLYRLERPKLMKTYQEHEKRI
ETLELQMKDTQEVTGTIISAGQDGMVKYWNIQQNTSVRTFKGHVGSVKSIRFDELRIATG
AKDKIRIWDFTYQEKKETINQGVDDESFFSKSPSKDIHGISAGSNQGKEFPGTPKSVKVK
VLHGTPENTPREKEKSSGSPRGKNKNVVKPKGSKENSKVSKEASSKGSKETSDVHKTHQV
AESKTMKSPRESKEKSEVATPTLRVRTCLPEVIVTES
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtcgctgagagaccgcctttagctgcagcggctgggagaaaagggcacctg
tcgccccagagggaggggaagggcgtgcggaggcgccccgagggtgaggatgatgagcga
agattgttggactggaggggtcacggtgggagacaccctacccagagtagtgtggagttc
gacagacagttggataaaatttctatgtggatggagaactggaaccattcgcagagatgt
cagttgatggagaaccttttgaggcggagtggacacaaccagttccagttcctttacact
gtcatgcagcccaatgtccaccgtgattttatctataacgccaaaagtcactttcctgga
atggactttaagtctgtcagtacaccagcaatgagggaggcacagcgaagggaccgagag
aaacaaaatgaaaagcggaggaagctgaagctttatcgacaggataactactttagggag
aaaagtgctcacctgaaggatgattcccaggtgactcacctggctgaggaacagaatgag
atggggctgaggctaccccagatccctagtggggccaaaatcaactctgataaaggaaca
gatctcagtgttctcaacttcaaatccaaacataaaaagaaaggagcgagtttcccaaaa
atcatcacatcaaataccttaccaaaaaatcacaaaaacaaaccaaagggcgtagtttca
gtggtaaactctgacgacatgtcatctgtcaatgccagtgcacctgtactaaggtttatt
gacatgccgatccgccgacacattcaggacgagggaaatatgagatacctcggctcatcc
ctcagttctcttccagtgtctacacgatttacactcgagtcctctgtcagctttattaac
gaagatcaaaatcagtctcagaaaaagaaaacgaaaactttgcttgatgaggaagcttgg
tctgtgatacattggtacctggaggaatggtcagatgtaagaaagaatgaatttcttcac
aaattcctcctcaagctcgatccccgacaacactattttatatcgagctttttatcgatg
cgacagtaccgagatttccttacaatgctgcctgagcacatctcattgaagatattgaat
tacatgacacctgaaaaaatactgaagtgttctatggtgagtaaagcatggcacgcccta
gctaactctaacaagttgtgggggtggaagtgtgaggaggtggaacttctcgtacccatt
ccatctaatccgtgctggaaacacatctacagggacaacatgcatctaaagatgaactgg
agcaatgggtcgtgtcgtacactggacctaaaggggcacacagacacagtagaggcggtc
accttcaaccatcggttatttgcaagcggcagtcaggataagactatcagaatctgggac
atcaagtcgggccgaccactccaagtccttaagggccatgaaaaaggggtgtggtgcctt
aatctcttcactgagactctactggtcagcgggtcatacgatggcactattaaggtatgg
aaccttcgtacaggaagtactgttaggactttactagcccacgacggtccagtgtgggcc
atggtcagacataacaacatcttagtgactgcctctcaggacaaaactgccaaaatctgg
gacatatcccgatgttacctgatacataacttgtacggccatacagaggctgtgtttgcg
gtcgaccttagtgaggacggagccctcacgatcactggctcagcagaccgaacgctgcgt
atctgggacactgtgacaggagaacagaagaagatgatttgggttagccagagtacctct
atcatggcggttagttacagtaagggatacgtggcctgtagttatggggagaccatctgt
ctgtaccgactggaacggccaaaactgatgaaaacttaccaggaacacgaaaaaagaata
gagaccctggagctacagatgaaggatactcaggaggtgacgggtacaataattagtgct
gggcaggacgggatggtcaagtactggaatatacaacagaatacaagtgttcggaccttt
aaaggacatgtgggttcagttaaaagtattcgctttgatgagcttcgaatagccactggt
gccaaagataagattagaatctgggattttacttaccaggaaaagaaagagactataaac
caaggcgttgatgatgaaagttttttctcaaaatctccatccaaagatattcatggcatt
tctgcaggttccaatcaaggcaaagagtttcctggaactccaaaatctgtaaaagtcaaa
gttcttcatggaactcctgaaaacacaccacgggaaaaagaaaaatcatctggttcacca
agaggaaaaaataaaaacgtggttaagcctaaaggttcaaaggaaaattctaaagtatct
aaagaagcaagttctaaaggttctaaagaaacttccgacgtccataaaacacatcaggtg
gcagagagtaagacaatgaaaagtccaagagaatctaaagaaaagtctgaagtagccacg
cccacattacgggttaggacttgtctccccgaggtcattgtgacagaaagttga
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