Argopecten irradians (bay scallop): 138318955
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Entry
138318955 CDS
T10542
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138318955
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
CEP104_ZnF
zf-C3HC4_3
zf-RING_2
TolA_bind_tri
zf-TRAF_2
Csm1_N
DUF3919
Motif
Other DBs
NCBI-GeneID:
138318955
NCBI-ProteinID:
XP_069117885
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All DBs
Position
3:50539625..50553198
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AA seq
558 aa
AA seq
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MSLETDGGIPSNSLQFKSSFRNPVGKPNFVSDPKEENRCPVCQSVLSNAIQLLCGHHVCQ
DDIERILQRSKTGTCHVQGCAMVFTSQDIFPDVCKRREISNLMVYCQYKDLGCPEKLPWK
DLSKHESVCKYQGRQCEQCRQVVLFSELEHHISNTCEQREIECQYCRDRIIVSTIQNHHD
SECRLFPVECPNQCGARDIVREQVRSHLAECPLQKAVCPFVKHGCTFEGSDEQLEVHKKE
GIVTHVDLLVNGKIATNQEYGAALADMKAMLDKVIKENALIPKLIEENEKLQKESKANKM
SIQEMKKVLASNGERVIQTGRKLEDKASVETVNKLQQEVAVIKGVVQESNKRMSNIERSG
MTVGYDGGGQPNATANVEKQVGLLDIRMSELDLRLQLQETVNHDGVLMWKLKDYGRRKRD
AINGKTLSLYSQPFYTSKYGYKLCGRVYLNGDGTGKGTHLSFFMVVMRGDFDALLPWPFQ
LPVTMKLLDQNGTRQHIAEHFMPSVTSNSFKRPTTEMNVACGVPCFALHSKLETETYLKD
DTIFLRIEVDCKNIPALY
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagaaacagatggtggaattccgtcgaattcattacaattcaagtcatcattc
aggaatcctgttggtaaaccgaacttcgtgtctgatccaaaggaagagaacagatgtccc
gtttgtcaatcagtactatcgaatgctatacaactactctgtggtcatcacgtctgtcag
gacgatattgaacgcatcttacaacgtagcaagacaggaacatgtcatgtacaaggctgt
gcaatggtatttacaagccaagatatatttccagatgtgtgtaaacgacgcgaaatatcg
aaccttatggtatactgtcagtataaggacttaggctgtccagagaagcttccatggaaa
gacctttccaaacacgaatctgtctgtaaataccaaggacgccagtgtgaacaatgtcga
caagtcgtactgttctcagagctggagcaccacatatcaaacacatgtgaacaaagggaa
atagaatgtcagtattgtcgggatcgcatcatcgttagtacaatccagaatcaccatgac
tcggaatgtagacttttcccagtggagtgtcctaaccagtgtggggcccgggatattgtg
cgggaacaggtcaggagccacttagcagaatgtccactacagaaggctgtgtgcccattt
gtcaaacatggctgtacatttgagggtagtgatgaacaactggaagttcataaaaaggag
ggaatcgtaacacatgtagatttactagttaacggaaagatcgccacaaaccaagagtat
ggagcagccctggcagatatgaaggctatgttggataaagtcataaaagagaatgccttg
atacccaaactcatcgaagaaaatgaaaaacttcaaaaggagagtaaagccaacaagatg
tctatccaggaaatgaagaaagtccttgcaagtaatggcgagagggtgatacagaccgga
cggaagttggaggataaagcgtccgtggagaccgtcaacaaactccaacaggaagtggcg
gtgataaagggtgtagttcaggagtccaataagaggatgtcgaacatagaacgatctgga
atgacagtgggatacgacggggggggacaaccgaacgccacagctaatgtagagaaacag
gttggtttactggacatcaggatgagtgagttggacctgagacttcaactacaggagact
gtcaaccacgacggggtcctgatgtggaaactcaaagattacggcagacgaaaacgtgac
gctattaacggaaagactctgtccttgtacagtcaaccgttctacacgagtaaatacgga
tacaaactttgtggaagagtttatctgaatggcgatggaaccggcaaaggtacacacctc
tcgttcttcatggtggtgatgcgtggcgactttgatgctctccttccttggcctttccaa
ctcccggttaccatgaaactattagaccaaaacggaaccagacaacacatcgccgaacat
tttatgccaagcgtaactagtaacagcttcaaaagaccgacaacggaaatgaacgttgcg
tgcggagttccttgttttgctcttcattctaaattagaaacggagacgtacctcaaagac
gacacgatttttctcagaatagaagtggactgtaaaaacattccagccttgtattaa
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