Argopecten irradians (bay scallop): 138318956
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Entry
138318956 CDS
T10542
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138318956
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-C3HC4_3
LEKR1
Rod_CreS
TSC22
Flu_PB2_7th
DUF724
Motif
Other DBs
NCBI-GeneID:
138318956
NCBI-ProteinID:
XP_069117889
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All DBs
Position
3
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AA seq
545 aa
AA seq
DB search
MSSLLRHSKFITPDPSVTNPQFVKNTDEFENCTACNRMLWNAFMLPCGHRVCPNGLDRVR
QNGRCMVEDCGTEYSDEEVRPDIFKRKELANLEVKCGNPDCHEIVCWGNLENHQSSCEYR
IASCEQCRKSIRASLLQKHLDEECEQRMCPCPKQCGTSTEAINMQNHLAHECSNAILDCP
NQCGITSMSREELHNHNNECPLRKQSCRFKSMGCRFEGRGHEVEQHTQEGLLYHVELLLT
THADTGNEEEIDKLKETIQKMLKESENIPKLQDENSRLRKENQTNKKAIQDMKKVLVSQG
EKVINVERQLDSRVSNDSVETIKRDVTVVSQTVQAAKQRIETLERTIGTAGQTGGTNVQV
VERVEKHVGLLDVRMCEMDLRLQLLETINQEGVLMWKIRDYSRRKTEAVNGKTLSLYSQP
FYTSQYGYKLCGRVYLNGDGTGKGTYLSFFVVVMKGDFDALLQWPFTLPVTLMLLDQNGT
GNHVRTTFTPNPASNSFRRPTTDLNVACGVPCFLQHTKLETDTYVKDDTIFLRAVVDCSK
ENPMF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctttattacgtcattccaagtttatcaccccggatccaagcgtgacgaaccca
cagttcgtaaagaacacagacgagttcgaaaactgcacagcttgtaatcggatgctttgg
aatgctttcatgttaccgtgtggtcatcgtgtttgtccaaatggcttagaccgtgtgcgt
cagaacggacggtgtatggtggaggactgcggaacagaatacagcgatgaggaggttcgt
ccagacatttttaaaaggaaagaactcgcgaaccttgaagtaaagtgtgggaatccggat
tgccacgaaatagtttgttggggtaacctagagaaccaccaatcatcctgtgaatataga
atagcgtcctgtgagcaatgccgtaagtccattagagcgagtctcctgcagaagcatttg
gacgaagagtgtgagcagagaatgtgcccttgtccaaagcaatgtggaacatcgacagaa
gctatcaatatgcagaatcatctggcgcatgagtgctctaatgctattctagactgtccg
aaccaatgtggaataacttcgatgtctagagaagagttacacaatcataacaacgaatgt
ccacttcgaaaacagtcgtgtcgctttaaaagtatgggatgtcgctttgagggtcgagga
cacgaggttgagcaacacactcaggagggactactctaccatgtagaactcctcctcacc
actcatgccgatacaggcaatgaagaagagatcgacaaactaaaggaaacaatacaaaaa
atgctaaaagaatctgagaatattccaaaactccaggatgaaaatagcaggctgaggaag
gagaaccagacaaacaagaaagcaatacaagatatgaagaaggtgcttgtctcccaggga
gaaaaggtgatcaacgttgaaaggcaactggacagtagagtcagtaacgatagtgtcgaa
actatcaaacgggacgtcactgtagttagtcaaacagtacaggcagccaaacaaagaata
gaaacactggagagaactattggcaccgccggacagactggaggcacaaatgtacaagtt
gtcgaacgcgttgagaagcacgttgggcttttagatgtcagaatgtgtgagatggacctc
cgactacaacttctcgaaactatcaaccaagagggcgttctgatgtggaagatacgagat
tacagtcgacggaaaacggaggcagttaacggtaaaacgctgtccttgtacagtcaaccg
ttttacaccagtcagtacggctacaaactctgtgggcgggtatatctgaatggggacgga
acagggaaaggcacatacctttccttctttgtagttgtcatgaagggtgactttgatgcc
ctgctacaatggccctttacactacctgtcactcttatgcttttggatcaaaacggaacg
ggtaatcatgtacgtacgacgttcacgcctaacccggcgagtaacagtttccgcagacct
acgactgacttgaacgtagcgtgcggcgtaccatgctttctccagcacaccaaactggaa
actgatacatatgtaaaagacgacaccatattcttacgggcagttgttgactgttctaag
gaaaaccctatgttttaa
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