Argopecten irradians (bay scallop): 138324084
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Entry
138324084 CDS
T10542
Name
(RefSeq) fringe glycosyltransferase-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr00514
Other types of O-glycan biosynthesis
airr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
138324084
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138324084
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
airr01003
]
138324084
Enzymes [BR:
airr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
138324084
Glycosyltransferases [BR:
airr01003
]
Glycan extension
O-Glycan
138324084
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
MIT_C
pEK499_p136
Motif
Other DBs
NCBI-GeneID:
138324084
NCBI-ProteinID:
XP_069125229
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All DBs
Position
5:complement(47901560..47933827)
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AA seq
360 aa
AA seq
DB search
MRCSLRKFLKISICLFISVISIVSYFHDNFEKSFIAQRQSFGQKQHGVLGPVDHQDSDIE
LLSRKQRNAMSVETITDDEKEKRKNVHPSLKSKNERTELSDIFIAVKTTKKYHDRRLKLL
INTWIGQAREETYIFTDDNDKLDLPDGHLINTNCSNTHYRIALSCKMAVEYDFFMLTGKR
WFCHLDDDTYLNVPGLVKLLQSYNHTDDWYLGRPSLRHPIEVMKRSNPEQKIAFWFATGG
AGFCISRSLALKMMPHASGGRFMTTSDMIRLPDDCTIGFIINNLLQKELTIIDRFHSHLE
ALWFVRNLQDQLTFSYSDTNIVHIDGFPKKQDPSRLYSIHCMLFPTADICDTLRKGITVA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgttctcttcgaaaatttcttaaaatttcgatatgtctgttcatttcagtaatt
tcgattgtgtcatattttcacgataacttcgaaaaaagtttcattgcacagagacaaagt
tttggacagaaacaacatggcgtcctgggacctgttgatcatcaagattcggacattgaa
ttattatcgcggaaacaacgaaatgccatgtcggttgagacgataacggacgatgaaaag
gagaaaaggaaaaatgtgcatcccagtcttaaatctaaaaatgaaaggacagaacttagt
gacatttttattgctgtcaaaacgaccaaaaaatatcatgatcgtcgtctgaagctcctg
ataaatacgtggatcggccaagcacgggaggagacgtacattttcacggatgacaacgac
aagttagaccttccagatggacatctcatcaatactaactgttctaatactcattatagg
atagctctcagctgtaaaatggcagtggaatatgacttttttatgctcacgggcaaaaga
tggttctgtcaccttgacgacgatacttacctgaacgttcctggtctagttaagctgctg
cagtcgtacaaccatacagacgactggtacctaggtcgacctagtcttagacatcccata
gaagttatgaaacgctctaacccagagcagaagatagcattctggtttgctacgggtggg
gctggtttctgcatcagccgcagcctagctctcaaaatgatgccgcatgcaagtggaggg
cgattcatgaccacttctgacatgatccgactgcctgatgactgtaccataggttttata
attaataacctgctacagaaggagctgaccattattgaccgtttccactctcacctagaa
gctctttggtttgtacggaatttacaggatcagctgacgttcagttactcggataccaat
attgtacacattgacggatttccaaagaaacaagatccatccagattgtactcaatccac
tgcatgctgtttccaactgctgatatatgtgatactcttaggaaagggataactgtagcg
tag
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