Argopecten irradians (bay scallop): 138324205
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Entry
138324205 CDS
T10542
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138324205
Spliceosome [BR:
airr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
138324205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_RP2B-bd
INT1_R3
INTS1_R4
INTS1_INTS2-bd
TPR_Atp25_C
SECTM1_C
Motif
Other DBs
NCBI-GeneID:
138324205
NCBI-ProteinID:
XP_069125387
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All DBs
Position
5
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AA seq
1741 aa
AA seq
DB search
MLNGNIKVNTSRKYSDQQDSIESYVMDIIREQLGRRQTMDTSSRNVIRLMTATCGYSQVR
IQVAQRLEMWLQNPKLTRSAQDLLMALCMNCNQYDQNDIEVLSQLVKIRMKTKPLLNHFL
SCIRELIPQHPENLRMMLTHTIYNELSNARNPNNMALISVMFQTASAQATKVLSEIFQDL
LSNKEDYLRALRALLREISRSLKQDLKISSFCLNLMQERTDTKFVEMDSALRERYILSVA
DMVTVTILIGITPSVREAKGDKQDSEVLHKYRQQTAMIQRDAVWWLHTIVSKHIGELKPE
QYIHCLHKVLFLESPEHYYNKDNWPSEGERGSLLRIASESPVLEDTLMRILVIGLSPDIP
MNPADAVELVDQLVKRAASLSCDGEKVLQMERLELVDALLNLCSYRHPTDISLPKGYSPP
TLAISNLYWKSWTILLILSAFNPQTFGITAWENYPTLKCLMEMVMTRNYKFPPPTTASED
RDIEDIKNQEKQVSEQEKQEILEFESHLAAATSKVTITESNSLLVTQLTGMKPSGVARQP
PAAMLEQVRILNESIHIGQMLCRSRKPDFLLDIIQRQGASQSMPWLAELVEASEGSLEVL
PVQCLCEFLLHDVTGVNPAQEEDTKQLEKHRKKQKVKKRAELVSYLRAIIHADPPDLASV
SQVLDYFLRRLSSTQASNRHLAIQGLSMLISNKDSPEEETMETDSGWGHSWLLEHLPTLA
IFPQIKPQICAALRQACQIETEPGLISACIIYLSFCCVSDRDRAWPYQCLYNLLILMLFV
GVSDRDKPGLISVCVSDRDKAWPYQCLYNPLILLLFVGVSDRDGAWPYQCLYNLLILLLF
ACQIETEPGLISVCTLLILLLFVGVSDRDRAWPYQCRCVRQRQSLALSVPACQIETEPGL
ISAGVSDRDGAWPYQCRYNLLILLLFACQIETEPGLISVDVDDAEMKSPETKEDSLWRPC
AAPEKQVPKQAEIVNVLSKVFTADGKRDPDTDLQFHRLIADITSRKAEISQIVVEVLFER
TRNEALFRDRFCRHVKACPLLKSLVACKSVSKDSLHQLMMSLSGADQTISSPAVSVIKHF
ILHSSPSTKSSPYPNLSDLVKKKSPADEGHLESRLTSCMRSAMASQTSSEVVSNVCQTMI
QTNTPNRSDVDTSMHTLLLDWLELLDPELVAQAPDLQHQLMFSPTKGTKQVSEETSAQSK
SCDPQSGRSYSNQAYLLALLTHQSSWSALHRSINTLLHKSPSNSFCPTTVLDFLWACLQI
PKIWQGREQKVSVKQPVENVLSMSQDQLETILNYIVEEAVTNESGQTDHKGIPLSSRVEL
LVTCTNNEESNIKFVAKQAQDALTDNRHKSVHQKVLVELYAQCPRLLSWLPDISTSLTDK
CLSQETVIQVDLISFRLLTSLGHAGHGRRNEDRMHDANIACRKLASQHPLLMLRQLPMMS
ALLKGKTQFKLGQLRHRNYLQLFTHILGLLEAMQPLVFRRDYSASHSDILESFISLLQGH
GMERILAPIVVKFIRYLQNYMMCEPQHSINVLQPHVGVFSNLTTVYPDMPTLKSLLAGLT
LPRQTESDTPHQVDMTLGLARPTSPWTVGQIAPYLQRLQNATDSSNIMDVLQDLDETSKR
KVDILEHFLGDLKKLLLDLNDKIRNTCYSLIMRYIRQVPRSGVQFLASFLQCLDSDNADI
ITSALKNLPEFCVLCQDHADVLLQKAFLVGTTTSIETSTYIVEALQTLNLETTLVVNKLD
S
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggtaatattaaagtgaacacaagtcgtaagtatagtgaccaacaagatagt
atagagtcctatgtaatggacattatccgtgaacagctgggccgccgtcagaccatggac
acatcctcccgaaatgtgatccgtctgatgactgccacatgtggttacagccaggtcagg
atacaggtggcacaacgactagagatgtggttacaaaacccaaagctgacccggtctgcc
caggatctgttgatggctctatgtatgaactgtaaccagtatgaccagaatgatatagag
gttctctcacaacttgtcaagatcagaatgaaaactaaaccactgctgaaccatttccta
tcttgtatcagagaattgatcccacaacacccggagaacttacgtatgatgctcactcac
actatctacaatgaactatccaatgccaggaatcctaacaacatggctctgatcagtgtc
atgtttcagaccgcatcggcccaggctaccaaggttctgtctgagatattccaggatctg
ctgtccaacaaggaggattatctccgtgcacttcgtgccctgctccgagaaatttctcgt
tctctcaaacaggatctaaaaatctcatcattttgtctgaatctaatgcaggagagaaca
gacaccaagtttgtagaaatggacagtgctttaagggagcgatacatcctttctgttgca
gacatggtcacggtcacaatccttataggaatcacaccgtccgtacgcgaggccaaggga
gataaacaagattcggaagttctccataagtatcgccagcagacagccatgatacagcga
gatgcagtgtggtggttacatactattgtgtcaaaacatattggggaacttaaacctgaa
cagtatattcactgtctacacaaggtactgttcctggagagtcctgaacattactacaac
aaagacaattggccgtcagaaggagagagagggtccctgttaaggattgcgtccgagtcc
cctgtactggaggatactttgatgagaattcttgtcatcggtctgtctcctgatattccc
atgaaccctgcagatgctgtagaacttgtggaccaactagtaaaacgagcggccagtctc
agttgtgatggtgaaaaagtgttacagatggagagacttgagctagtagacgctctactt
aacctgtgttcatacagacaccctactgacatctctctaccaaaggggtacagcccgcca
acgctggctatctctaacttgtactggaaatcctggaccatcctcctcatcttatccgca
ttcaaccctcaaacatttggaattacagcttgggagaactaccccacactaaagtgtctg
atggagatggtgatgaccagaaattacaagttccctcctccaaccacagcttcagaggac
agagatatcgaggacatcaagaatcaggaaaaacaggtgtctgaacaagagaagcaggaa
atcttagaatttgagagccatctggcagctgctacaagtaaagttacaattactgagtcc
aacagtttacttgttactcaacttaccggcatgaaacccagtggagtagcgcgccagccc
ccagcagccatgttagaacaagtccggatcctcaatgagagtatccacattggacagatg
ttgtgtcggagtcgtaagccagattttctacttgacatcattcagagacaaggagcctca
cagtccatgccgtggctagctgagttagtggaggcgagtgagggatccctggaagtttta
cctgtccagtgtctgtgtgagttcctactccatgatgttactggtgtcaacccagcacaa
gaggaggacactaaacaactagagaaacaccggaaaaaacagaaagtgaagaagcgtgct
gaacttgttagttaccttcgtgccattatacatgctgatcctcctgatttggcatctgta
tctcaagtccttgattatttcctccgacgactctcatccacgcaggcctcaaaccgacac
ctggccatacagggtctctccatgttgatatctaacaaggacagtccggaggaggagacc
atggagactgacagtggctggggccacagctggctgttagagcacctcccaacactggcc
atcttccctcaaatcaagccccagatatgtgctgccctcagacaggcgtgtcagatagag
acggagcctggccttatcagtgcctgtataatctacttatccttctgttgcgtgtcagat
agagacagagcctggccttatcagtgcctgtataatctacttatccttatgttgtttgta
ggcgtgtcagatagagacaagcctggccttatcagtgtctgcgtgtcagatagagataaa
gcctggccttatcagtgtctgtataatccacttatccttctgttgtttgtaggcgtgtca
gatagagacggagcctggccttatcagtgcctgtataatctacttatccttctgttgttt
gcgtgtcagatagagacagagcctggccttatcagtgtctgtacactacttatccttctg
ttgtttgtaggcgtgtcagatagagacagagcctggccttatcagtgccggtgtgtcaga
cagagacagagcctggccttatcagtgcctgcgtgtcagatagagacggagcctggcctt
atcagtgccggcgtgtcagatagagacggagcctggccttatcagtgtcggtataatcta
cttatccttctgttgtttgcgtgtcagatagagacggagcctggccttatcagtgtcgat
gttgatgatgcagaaatgaaatctccagaaactaaggaggacagtttgtggagaccatgt
gcagccccagagaaacaggttcccaaacaggctgagatagtgaatgttctctcaaaggta
tttactgccgatggtaagcgggaccctgatacagatctccagttccacaggttgattgct
gatataacttcaagaaaagctgaaatatcacagattgttgttgaagttttgtttgagaga
acaaggaatgaggcgttattcagagaccggttttgtaggcatgtgaaagcttgtccgctg
ctgaagtctcttgtagcctgtaagagtgtcagtaaagactccctccaccagttgatgatg
tcgctgagtggtgctgaccagaccatctcatcacccgctgtgtctgttataaagcacttc
atccttcactccagtccatcaacaaagtcttcaccttatccaaatcttagtgatttggta
aagaaaaaatcacccgctgatgaaggtcaccttgagtctcggttaacatcttgtatgagg
tcagccatggccagccagacctcaagtgaagttgtcagtaatgtctgtcagacaatgata
caaacaaacacaccaaacagatctgatgtggacacctcgatgcacaccctgttattggac
tggttagaacttctcgaccctgaactggtggctcaggcacccgaccttcaacaccaactc
atgttctcaccaaccaaaggtactaaacaggtgtcggaggaaacgtccgctcagagcaag
tcatgtgaccctcagtcaggtcgtagctatagtaaccaggcctatctgctagcccttctc
acacatcagagtagctggtcagctctccataggtccatcaacacactactacacaagtct
ccgtctaacagtttctgtccgaccactgtgctggactttctctgggcatgcttgcagatt
cctaagatatggcaaggtagagagcagaaagtatctgtgaaacagccggtggagaatgtc
ttaagtatgagtcaggaccagctggagaccattctgaattatatagtagaggaagcagtg
accaatgagtccggccaaactgaccacaagggaataccactgtctagtcgagtggagtta
ctggtcacttgtaccaacaatgaggagagcaacatcaaatttgtggcgaagcaggcacaa
gatgcactgactgacaacagacataaaagtgtacaccagaaggtcctggtggagctgtat
gcccagtgtcctcgactgttgtcatggttacctgatatctccacctctcttaccgacaaa
tgtctctcccaggaaactgtcatccaggttgatctgatctcgttccgtttgctaacaagc
ttaggacatgctggccatggtcgaaggaatgaggatcgtatgcatgacgctaatatagcg
tgtcgtaaactggcttcccaacatcctcttctgatgttacgtcagttgccgatgatgagc
gccctactgaaaggaaagactcagtttaagttaggacagctccgtcacaggaactacctc
cagctatttacacatatccttggcttactggaggccatgcagccattggtgtttaggaga
gactacagtgccagtcacagtgacatcctcgagtcctttatctcactcttacagggacat
ggtatggagagaatactggctccaatagtagtaaaatttattaggtaccttcagaactac
atgatgtgtgagccccagcattctataaacgttctacaaccacatgtaggagtattcagt
aacttgaccacagtctaccccgacatgcccactctcaagtccctgttagcagggctgacc
ctgccaagacagacagagagtgacactccccaccaggtagatatgaccctgggtctggcc
cgccccacctcgccctggaccgtgggacagatagcaccgtacctacagcgactacagaac
gccacagactcatcaaatattatggatgttttgcaagacctggatgagacatcaaagaga
aaagttgacattctagagcacttcctgggcgacctgaagaagttgttgttagacctgaac
gataagatcaggaacacatgctactcactcatcatgaggtatatccgccaggtgccaagg
tctggtgtacagttcctcgccagctttctccagtgcctcgatagtgataacgctgatatc
attacaagtgctctgaaaaatctgcctgagttctgtgtcctctgtcaagatcatgctgac
gtactcctacagaaggccttcctggtaggtaccacaacctctatagagaccagtacctac
atcgtcgaggcactacagactctcaatctggagaccaccttagtagtgaacaagttagat
agctga
DBGET
integrated database retrieval system
