Argopecten irradians (bay scallop): 138324806
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Entry
138324806 CDS
T10542
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138324806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138324806
Membrane trafficking [BR:
airr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
138324806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
138324806
NCBI-ProteinID:
XP_069126066
LinkDB
All DBs
Position
6
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AA seq
468 aa
AA seq
DB search
MMSGSRNIKQITRHVDAGVIHLTSETTFSANQIEIESPLSPSSSYVKAKLEKEISPDFIS
AFILAHWDNILGPRILNVWLGTECHITEHMMNQVCSRSLSGEMCRDIQDSFVDFKFLDLA
EMNMILAGFVFIARGSSGLSVHSLSVLMPHSELQTYLEMHDLLSRCLHGIINKLRRFLHV
SDTPQPDINREFVNRSRDCLKMLTSIHKFSLALPINLSETFLSPSHQLEREFLCRCIAAH
LLTFGHSLVIGENTNRINLLITTLALFNTKKERRCSMKIRDGCTCHHDLFVQGIVKKCSD
VYDLPVAQIVDGKYPVSIINLTTRDVKQAYSYQHQRFYSPQGVGPNNELTLIPVEHSENL
VLTLMDELEKLPAECGVREAYISHFVMTLQRKALALIKYVEGETNFGSTMFRSGMKKLRQ
DLGIASDGDLQIILAVAEKLKPGIIYFVFGDGQWTSRGSDVWSSGVIE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaggttcacgcaatattaaacaaatcactcgccacgttgatgctggagtgatc
catctgacatcagaaacaactttctctgccaatcagattgaaatcgagtccccacttagt
ccatcatcgagttatgtcaaagctaaattggagaaggagataagtccagattttatcagt
gcctttatcttggcacactgggataacatcttaggaccgcgcatcctgaacgtatggctt
ggtacggaatgccacataacggaacatatgatgaaccaagtttgtagtcgttcactaagt
ggcgagatgtgtagagacattcaagacagcttcgtagatttcaaatttctggacttggcg
gagatgaacatgatcttagcaggatttgtgtttatagcgcgcggcagtagcggactaagt
gtccactccttgtccgtattgatgccacattccgagctccaaacttacctcgaaatgcat
gatcttttgtctcgatgtttgcatggaatcatcaacaaactgcggagatttttacatgtg
tcagatactccacaacccgatatcaacagggagtttgtaaacagatccagagactgtcta
aagatgctgacatctatacacaagttttcgttagcactgcctatcaatttatcagaaaca
ttcctgagtccctctcaccaactggagagagagttcctatgtcgctgtattgctgcccac
ctcctaacgttcggacacagcctcgtgatcggtgaaaacacaaacagaattaacttgctg
attacaacattggcgctattcaataccaaaaaggagagacggtgttcaatgaagatccga
gacggctgtacatgtcatcacgatctatttgtacagggcattgtaaagaaatgtagtgat
gtctacgacttgcctgtggcccaaatcgttgatggcaaataccccgtcagcatcattaac
ttgacgactcgggacgtgaaacaggcgtattcttatcaacaccagaggttttacagtccg
caaggagtcggcccaaacaatgagcttaccctaatcccagtagaacacagtgagaatcta
gtcctgacactgatggatgagttggagaagctgccagccgagtgtggagtgagagaggca
tacatatcacacttcgttatgacactgcagagaaaagccctggctctcataaaatatgtg
gaaggtgaaacaaattttggaagcacaatgttccggtcggggatgaagaaattacgacaa
gatttaggaatagcatctgatggagaccttcagatcatactggctgtggcggagaaacta
aaacctggcatcatttattttgtgtttggtgatggtcagtggaccagtagaggttctgac
gtttggtcctcaggtgtcattgagtaa
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