Argopecten irradians (bay scallop): 138328870
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Entry
138328870 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138328870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138328870
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138328870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_13th
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_6th
Ig_NUP210_9th
Ig_NUP210_3rd
Ig_NUP210_5th
Ig_NUP210_16th
NUP210_Ig
Ig_NUP210_8th
Ig_NUP210_14th
Big_2
AOC_like
UBC_like
HORMA
Motif
Other DBs
NCBI-GeneID:
138328870
NCBI-ProteinID:
XP_069131686
LinkDB
All DBs
Position
8:complement(675067..734503)
Genome browser
AA seq
1901 aa
AA seq
DB search
MAATYNEIVIVILTLFTVNSVINSIHGARLSDPKILLPYHSTVVTNFTLHINLTKEESHV
QDSCYTWRSTQQEVATVQLVNSTDGECAFSAVISAVSKSSHRKTSIVLAENKVTREVLRC
IVIVESLHRFEIQTTTRLLYLEDSPEELTIRGFDEEGNVFSSLAGLRFEWSLEPDTSGDQ
DTIIDASNILRIIKFSESHYTRPSYIDRLEGRGLQGDMILVEGIRTGSANVRSVIRDPGY
KNVQPYVVKIMVIANLMVSPAEAYVLKYSMVKYTVELIKQNSIIEIEMPSEQFYLEVQDH
MICEFNAKTSYATAAELGSTEIVLMDKNIKNQDVLRRPSAMMYVVTASRLAFVILPHKKW
VLETGREYEVLIEVYDKNSHRIYPSDNVIIKAVFPKEYFQVLFSTKNGTYHRVKTLDNGQ
TVLDGTLATVIRADGSEYPISPAIKQMQPVEIYDPIVVKPSKLFFPWDPKVPTSHRYQLQ
ATGGSGEYIWKSSQSQVSIVNMHGEITTGHTGGANITAADTRNQAHWGLSTVRVLPPSDM
LFRPRRVEAAVGTDLELPLAVFALFEGTQQEFNDCRMMRLNVTFTDQTVFKYIEDKISLP
ENGCRFVKVKAVIQGHTEVTASYSVGNIQLESTVTIAAYDPLQAVDPEKEAVVAVGSLKE
VVFRGGPQPWVIDSSKYFQTLSPEKPDIVKQHQLRSFGNNRGFHNFLVTCKDIGKQKLTL
RVGNDKTAKNQYPASEEVSIIYNCAAPVELHLTPLVKTTDKDLPPCPVIRDPTQSVPVHC
SRDLDILVTVTDSAGNRFDNFSSLEFEWTRTDHSLGSLAMDTGVMSEVSTSSAGVTTVKN
FQTLNPAGRPGYITVTATVNRYSDKHLRDAGSRIYAQITPPLSKSLQLKLVEEAVVSPDM
ISVFNHPSNKVTVNIRKGSGYFYIHPSQSDIVKIDYSDQKHEMLVKPLSDGSLSVTVFDL
CIDVPDPPVATVFVSGVGSIQLSAMDKVEVGKDFQARVKVLDMHGKPLQASFFPLMGLRL
VPASTIITVKPDLEAKEDKFTAYYTVHGAVVGHTSLEARATPRPDVTVTSQAKAVEVFPP
LKLIPQNITLIIGALFQVLSKGGPTPQCTVLFSIANDDIALVSSSGLLDAQELGSTRVIG
QAVGQDPETGETIVYSQDEAQVHVVPLTDIRIHAPLTRLQTGTRMPMYAVGATEHQTPFT
FGSAIPPLTFSWSVSNKDVVFLENVFHSSGVFPPEQSDFANQLVAREPGRVTVKLEVSPT
RFRKVQVSGQVQLTDELQIEVFQKLAVISPSVCDGKLLMTPNTEAVVKTNRDGAAKVTYT
VLPSSGDQRVVTVGDGGLLSSGPRLGGRHALHINIQEEFVNVKPVSYLMINSDTVLRTSG
GMLKKIPVGSTLHFSVSYHDNIGEQFYATNVKMHYRFSRYDLVQAGYGGENNTLVVKVSD
VGQTILKVWDKQNPWLADYINIHADYAIMPVKVIMSLGEIICFQSSLVSVKGYPGAWSSN
NGNIHVDKVSGIAMATGVGQSFVDYNVSSTVSTYMEVTVSPIRKLTLDSSVDHLTNVQSR
GRAPFITVVLDNEIEVLGENCTARIQENHFHPQHIPFWCELGFTGRSPEIAVEDLFTTQP
SFDLKTGKFGCQINQVSRPMIKQQISTLNMDVSLSVGVSAREGQPEVMAEQHVFSFLPSF
HIHQTEVHLSTVNQLSSIRVSTTSRLMECIEVFVSDPSILESLSPEKDTQSGAVLLYPVR
LIESAALWEKDQIDVHVEMTCQKTGQRVKLPVFVSLIGQKPDYISTYRGSGWQSLVRNIF
YNYQSWLFIILVIILTALAVIIGYHAVFGPKYRAANPSVFMGPAGAATPVNYSPQAVMGP
PYTPYAAATPKTPYLWSPGYSPVDGTTPRQRRSPYQRTPTS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacttataacgaaattgttattgtaattttgactttatttaccgtgaacagt
gttattaattctatacatggtgctcgtcttagtgatccaaagatattgcttccataccac
agtacagtggtaacaaattttacgctacacatcaacctgacgaaggaggaatctcatgtt
caggacagttgctacacatggcgttcaacacaacaggaggtggccactgtccagctagtt
aatagtacagatggggagtgtgcattctcagcagttatctcggcagtgtccaaatcatct
cacaggaaaacatccattgttctggcagagaacaaagttactcgcgaagtgttgagatgt
attgtgattgtggagtcactacatcggtttgaaatccagacaacaactcgacttttgtac
ctagaagattctcctgaggagcttaccatccgtggctttgatgaagaaggaaatgtcttc
tctagtctggctggcctgcggtttgagtggagccttgaaccggacacctcaggcgaccaa
gacactatcatcgatgccagcaatattctccgaattattaaattttcggagtcccattac
acacggccgtcgtacatcgatagattggagggacggggtcttcagggcgacatgatactg
gtagaaggtataagaacgggcagtgccaatgtgaggtctgtcatacgagatcctggctac
aagaatgtccagccgtatgtagtgaagattatggtcattgctaacctgatggtcagtcca
gcagaagcctatgtactaaaatactccatggttaaatatactgtagagctcatcaaacag
aactccattattgagatagagatgccatcagaacagttttatttagaagtccaggaccac
atgatttgtgagtttaatgccaagacatcatacgccacagcagcagagctcggatctaca
gaaatcgtacttatggataaaaatataaagaaccaggatgtcttaagacgaccatcggcc
atgatgtatgttgttactgcaagccgtctagcatttgtcatcctgcctcacaagaaatgg
gtattagaaacaggacgagaatatgaagtactaatagaggtgtacgataaaaatagtcac
aggatctatccttctgataatgtgatcatcaaggcagtgtttcctaaggaatacttccaa
gtcctgttctctaccaagaatggtacataccacagggttaagacactagacaacggacag
acggtgctggatggaactctggccacggtcatcagagcggatggatctgagtatccgatc
agccctgccatcaaacagatgcaaccagtggagatttatgaccctatcgtggtgaaacca
tcaaaacttttctttccctgggatccaaaagtgccaacaagtcaccgctaccaattacag
gcgacaggaggaagtggagagtacatatggaagtcgtcacagtcgcaagtgtctattgtc
aacatgcatggggagataactacgggtcacacaggaggtgccaatattacagctgcggac
accaggaaccaagctcactggggtctgtctactgtacgagttctgccaccctcggatatg
ttgttccgtcctaggagggttgaagccgcggtggggacagacctggagttacccctggct
gtatttgctttgtttgagggaactcaacaagaatttaacgactgtagaatgatgagactg
aatgtcactttcactgatcagactgtgttcaagtatatagaagataaaatttccttgcct
gagaacggttgtcggtttgtgaaggtcaaggctgtgatccaaggtcatacagaggttaca
gcctcttattcagtgggtaacatacaactagaatccacggtgacgatcgctgcctatgac
ccacttcaggctgtagacccggagaaggaggcagtggtagctgtaggctctctaaaagaa
gtggtgtttaggggtggtccccagccctgggtcatagactcctcaaagtacttccaaacc
ttgagcccagagaagccagacatagttaaacagcatcagttgcggtcgtttggcaacaac
agaggattccataactttttggtgacatgcaaagatattggaaaacagaagttaaccctg
agggttggaaatgataaaacggccaagaaccagtacccagcctcggaggaagtttccatc
atatataactgtgctgctccagtagaactacacctgaccccactagtgaagacaacggac
aaggacctaccaccatgtcctgttatacgagatccaacacaatcggtacctgtacactgt
agccgagatcttgacatattggtgactgtgacagactcagccggtaacaggtttgacaat
ttctcctccttggaatttgaatggacacgcactgaccattccctgggctccttagctatg
gatacaggtgtgatgagtgaggtcagcacgtccagtgcgggagtcacgactgtaaaaaac
tttcagaccctgaacccagctggtcgccctggttacatcactgtaactgccactgtgaac
cgctactctgacaaacatctccgcgatgctggatctaggatatacgcccagataactcca
cccctcagtaagtctttacagttaaagctggtggaggaagctgtcgtttctccagatatg
atatctgtcttcaaccatccatctaacaaggtgaccgtaaacatacggaagggttctggc
tacttctacatccacccatcccagtccgacatcgtgaagattgactacagtgaccagaaa
cacgagatgctggtgaagcccctctctgatggttccctgtcagtgactgtgtttgacctc
tgtattgatgtgcctgaccctcccgttgccacggtgtttgtatccggtgttggaagtatt
cagctgtctgccatggataaggttgaagtaggtaaagacttccaagccagagtaaaggtg
ttagacatgcatggaaagccactgcaagcgagtttcttccccctgatgggcctccgattg
gtgccagcttctactatcatcacagtcaagcctgatcttgaggcaaaggaggacaaattc
acagcatactacacagtacatggggcagtggtgggccatacttcactagaggcccgagcc
acacctaggcctgacgtcacagttaccagtcaggccaaggctgtggaggtgtttcctcca
ctgaagctgatcccacagaacataactctaattattggagcactattccaagttctgagt
aaaggtggccccacccctcagtgtacagttctcttctccattgccaatgatgacattgct
ctggtgtccagcagtggtctactggacgctcaagaactgggctcaactcgggtcataggt
caagctgtaggtcaagacccagagacaggggaaacaattgtatattcccaggatgaagca
caagtacacgttgtacctctgactgacatacgaatccacgccccactgacacgactacaa
actgggacacggatgcccatgtatgctgttggagcaacagaacaccagactccatttaca
tttggtagtgctattccgcctctcaccttttcctggtccgtatctaacaaagatgttgtc
tttctggagaacgtcttccattctagtggagtcttccctcccgagcagagtgactttgct
aaccagctggttgctagggaacctggtagggtcacagtcaagctagaggtcagcccaaca
agattcaggaaagtccaagtcagtggtcaagttcagctgacagatgaacttcagattgag
gtgttccagaaactggcagtgatcagtccatctgtgtgtgatggtaaacttctgatgaca
ccgaatacagaggcagtcgtcaaaactaacagagacggtgctgccaaggttacctacact
gtgctgccctctagtggtgaccagagggtggtaaccgttggtgacggaggactgctgagt
tctggacccagactgggagggaggcatgcccttcacattaacattcaggaggagtttgtg
aatgtaaaacctgtgtcctacttgatgataaactcagacactgtattgaggacatcagga
gggatgctgaaaaagatcccagtcgggagtactctccatttctctgttagttaccatgac
aacatcggagaacagttttatgcaacaaatgtgaagatgcattacagatttagcaggtat
gatctggtacaagctggatacggtggagaaaacaacacccttgtagtcaaggtctcggat
gtaggtcaaaccattctcaaggtttgggacaagcagaacccctggctagctgactacatc
aacatacatgcagactatgccatcatgccagttaaagttattatgtctttgggagaaatt
atctgcttccaatcatcacttgtgtctgtgaagggctacccaggagcttggtcttcaaac
aatggcaatatccatgtagacaaggtgtcgggtatcgctatggctacaggagtgggccaa
tcatttgtggactataatgtatccagcacggtgtccacttacatggaggtgactgtttct
ccaataaggaagctgacccttgacagtagtgttgaccacttgaccaatgtccagtctcga
ggaagagccccctttatcactgtagttctggacaatgaaattgaagttctgggtgaaaac
tgcactgccaggatccaggagaaccatttccatcctcaacatattcctttctggtgtgag
ctgggattcactggcaggtccccggagatagcagtagaagacttgttcaccactcagcca
agctttgatctaaaaacagggaagtttggatgtcagatcaaccaggtatctaggccgatg
ataaaacagcagatcagcaccctgaacatggatgtgtcattgtctgtgggtgtatcggcg
cgtgaaggtcagccagaggtcatggcagagcagcatgtgttcagcttcctaccctcattt
cacatccatcagactgaggttcatctgtctacagtcaaccaactgtcgtctatccgagtg
tctacgacgtctcgactcatggaatgtatcgaggtatttgtgagtgatccgtccattcta
gaaagcctgtccccagagaaggacacacagtctggcgctgttctcctttacccagtccga
ctgatcgaatcggcagccctctgggagaaggaccagatcgatgttcatgtagagatgacc
tgtcagaaaactggccaaagggtcaagctgcccgtgtttgtaagccttattggtcagaaa
cctgattatatcagtacctaccgggggagtggctggcagtcgttggtcaggaacatcttc
tacaactaccaatcctggctcttcatcattctcgtcatcatactcacagccctcgctgtc
attataggttaccatgctgtgtttggacctaagtaccgagctgctaatcctagtgtattt
atgggacccgcgggggcggccacacctgtcaactattctccacaagctgtgatgggacct
ccgtatacaccatatgctgccgcgacacctaaaactccgtacctctggtctccgggatat
agtcctgttgacggcacaactcctcgacaacgcagatctccataccaacgtacaccaaca
tcttga
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