Argopecten irradians (bay scallop): 138332232
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Entry
138332232 CDS
T10542
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138332232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138332232
03032 DNA replication proteins [BR:
airr03032
]
138332232
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138332232
mRNA cycle factors
Common to processing body (P body) and stress granule
138332232
DNA replication proteins [BR:
airr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
138332232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
138332232
NCBI-ProteinID:
XP_069136335
LinkDB
All DBs
Position
9:37031405..37065418
Genome browser
AA seq
1896 aa
AA seq
DB search
MAAKTDIVRISYNELENIVHRKAEKSSSHHGRQTKEDDPYSRTDKKKERRQKRPTRGVYQ
PPSILRHKQQQEQGEGGNWNGEPEGEVQSECWEEELDVQSHGSTTNSSKENSVEKEIDEV
LTNIRNLQVQSDDGLTSPGLGDTKKRPKTGKRPEIQRYVPKGKLLEQSQKDSESEEVEDV
SRTQPMNQATDDTTSPRKIDFGKSSPMDVKITVMNQAPSTQESKSDQVTPQRSDSESRLI
GGQSEPQVSGGQRLRSAGSQEDHQMQNRNKSEHHGQKFPRDRYHGQKRQVMAERGGKRAG
GFGRGHNQEEGYGTWPREKGGGRGGGNVQKEDSPPTENWDVELRIVEKGDTDEKQDKQNQ
NTSQANVVSGAETPKPQRINQRRPRDRPVKQTTVSINDAPDEPEEGGGNPIPTMIFERRN
SNSSLTGSTHGGNGNLKQKPPKGQISGKGPPKRYSLSTMRRQRTGSVSSDVSTASDLSID
DETTTRILDWDKEVEREMAKQVQDETMKLKEFLERQGDFPGMDFGMGSDQKQSDRMSESG
SEYSVYRDKTSERQYRPSRAKDNQYSDNKNRNSGSRDRQHDNSEHWYNELPRSRRKNRRS
SLNGRQSRDSSVSSVHSVQSYQGDDGERMYHSLSLPRKGRRRRRSSNASLKDMSSSREAL
NNPENLSLKITFAQDHNEKRQVTMQGPGQGHQQGHQQGHGQGHHQGNQQVSGHQQQPGQK
NQAQSSVPRGRGRGRARSAERSREKHGSGSQHNEYRGQSGQGKEFHDRGGMGRGQDRRSV
GRGQDTRGSRGSGQDTRVGSRDNRGHVHDARGRGQDIRGQGNDTRGQAHDARGQGQEIQN
TNSRGYHDTRGHGKEQHHRHDRRERRHSGRDEPMHETGTSPRGGLIKLPSGALHSDSHNL
HDEAQGHGRKNLGPQSSHPGLSASSARGGSGQRRLFDPNNPNKPIMIQEGNKLHQDDTKP
LHFQDQDNPTTPTSPLGQHPPFHQGYPPMGPAAPYFQNYDPRFVEAGRGFPQRHPGPHSV
PLPGHPGPPGGYYFPYPVPYRDMAMYPEEMFHRDPYSQSGDFDQDLVMSGRSRSQCRVMA
ERMIQESLSLDSQLSELVARRLSSKDFTTLTQIRQDLQSKCEQVILLDLDVANKHNAEQL
LWKSVYYQVIEVLRKNLSEEKDEETKAQLTQILNQGTEFYERLLQKLQQTFNFQLEAFLD
SSVLPPDNISRTVKLALLSTQRTLICLGDIARYREQSNDTGKVNYGRARNWYSKAQQIAP
KNGRPYNQLAILALYTRRKLDAVYYYMRSLAASNPFLTARESLISLFDEARKKAQNSEKK
REQEKEKTRQLRQQKRQQGERIEVWVSSDGTSTENNDDEGTDQDLSKLDAVELNKRFVLS
FLNVHGKLFTKVGRETFPECCAQMLKEFDALLRRGAIGPTRLLQLMAINMFAIDNTALKT
PVSPSDPGSGLLRSELQEQAVQLGLDMFGILVRRCSEQLKEHLVSNDYPAHMFSRELEEQ
VPGIKVWTDWMYCNPTLWNPPPNIHEFTLGPDVDVWQSCADLCNILRNVDTSHVKLYREK
KEGCDPVILHEDNMLAGFVPLLSLPIKFHYVHSTVTKEIAQDCCRIEKLQDFGDYLCGIP
TPMLSFDVEKKQYYSVAPPTGFSDDEKEDVKSEGHLSGEEDVIVESESEEITGEDDEHVR
HLREKKEELKRIKEEQKKQKETFQKIIDKNRHHLIELEIHPIFLVPDTNCFIDHLSSIQK
LIQHQKYTVTIPLIVINELDGLAKGSRMGQYDSQEHANKVKKSAEETIKYLEAEFQKKNN
SLRAQTSKGNIMETISFRSEETETDAGNNDDLILSCCLHYCKDKARDFMTKDKDAPIRLY
RDVVLLTDDRNLRLKAHTYNVPVKDVPSFIQWSKVT
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaaaacagatattgttcggatttcttacaatgaactggaaaatattgtacat
aggaaagcagaaaagtcatcctcacaccacggaagacaaacgaaagaagatgacccgtac
agtcgaacagacaaaaagaaggagagacgtcagaaacgcccaacaaggggagtgtaccag
ccaccgagtatcttaaggcacaagcagcagcaagaacagggtgagggagggaattggaat
ggcgagccagaaggagaggtacagagtgagtgttgggaagaagagctggatgtgcagagt
catggatcaacgaccaacagcagcaaggagaacagtgtggaaaaagagattgacgaggtc
cttacaaatataagaaacttacaagtgcagtctgatgatgggctgaccagtccaggccta
ggagataccaagaagcgaccaaagacaggaaaaagaccagagatccaacgatatgttcca
aagggaaagctgcttgaacaaagtcagaaagactcagaatcagaggaggttgaggatgtg
tcacgaacacagccaatgaatcaagctactgatgatacaacctctccacgtaaaattgac
tttgggaaatcctctcccatggatgttaaaattacagtcatgaatcaggcaccttccact
caagaatcaaagtctgatcaagttactcctcagagatctgacagtgagtcaaggttaatt
ggaggtcaaagtgaacctcaagtaagtggaggtcaaaggttgaggtcagctggaagtcaa
gaagatcaccaaatgcaaaacagaaacaaaagtgagcaccatggacagaagtttcccaga
gatagatatcatggtcagaaaagacaggtcatggctgaaaggggaggtaagcgtgcagga
ggttttggaaggggacataatcaagaggaaggttatggtacatggccaagagaaaaggga
ggaggtagaggaggaggaaatgtacagaaggaggatagtccacctactgaaaactgggat
gtagaattaaggattgtagaaaaaggtgatacagatgaaaaacaggacaaacagaatcag
aatacctcacaagctaatgttgtttctggagcagaaacacctaaaccacagcggattaat
caacggcgtcctcgtgaccgcccagtcaagcaaacaactgtgtcaatcaacgatgctcca
gatgaacctgaagaaggtggtggcaatcccataccgaccatgatctttgagcgacggaac
agtaattcatcattgactggcagtacacatggtggaaatggaaacctgaaacaaaaacct
ccaaaaggtcagatatcgggcaaaggtccacctaaaaggtactccctgtcaacgatgaga
cgccagagaacaggaagtgtcagcagtgatgtgagtactgccagtgatctgagtattgac
gatgaaaccaccaccagaattctggattgggataaagaagtagagagagagatggctaag
caagtccaggatgaaactatgaagctgaaagaatttctagagaggcaaggtgattttcct
ggaatggactttggaatgggaagtgatcaaaaacagtcagatagaatgtcagaatctggt
agtgagtatagtgtttatcgcgataagacaagtgaaagacaatacagaccttctcgagct
aaagacaatcaatatagcgataacaaaaatcgtaactcagggtctcgagacagacagcat
gataacagtgagcattggtacaatgagctgcccagaagtagacggaaaaaccgacggagt
tccctcaacggtcgacagagtagagattctagtgtatccagtgtccatagtgtccagagt
taccaaggagatgatggagagagaatgtaccatagtctgagtcttccacggaaagggagg
cgccgcaggaggagcagcaatgctagtcttaaagatatgagctctagtcgggaagctttg
aataaccctgagaacctcagcctcaaaatcacatttgctcaagatcacaacgagaaacgt
caggtaacaatgcaaggacctggtcaaggtcaccaacaaggtcatcaacaaggtcatggc
cagggtcatcatcaaggtaatcaacaagtttctggtcatcagcaacagccagggcagaaa
aaccaagcacaaagttcagttccaaggggtagagggcgaggaagggcacgaagtgctgaa
aggagccgggaaaagcatggttcagggagtcagcataatgaatacagggggcaaagtgga
cagggcaaagaatttcatgacagagggggtatggggaggggacaagacaggagaagtgta
ggccgggggcaggacacaaggggtagccggggatcaggacaagatactagggttggaagt
agggacaacagaggccatgttcatgatgccagaggtcgaggccaggacattagaggtcaa
ggtaatgacacgaggggtcaagctcatgatgcgaggggtcaaggacaagaaatacagaat
actaattcaagaggttatcatgacacaagaggtcatgggaaggagcaacatcatcgccat
gacaggcgtgaacgtcgacactcaggacgtgatgaacctatgcatgagacgggaacctca
cctcgtggaggactcatcaagctaccgtcaggtgctcttcactctgattctcataattta
catgatgaagctcaaggtcatggcaggaaaaatcttggtcctcagtcttctcacccaggt
ctgtccgctagctctgctagaggtgggtctggacagaggaggctgtttgaccccaataat
ccaaacaaacccatcatgatacaggagggtaacaaattacatcaggacgataccaaacct
ttacactttcaggatcaggataatcctacaacacctacctcacccctcggacaacacccc
ccttttcaccagggatacccaccaatgggtcctgctgcaccctacttccaaaactacgat
cctcggtttgtagaggctggtcgtggcttcccacagcgacatcctggtccccattcagta
cctctccctggccacccagggcccccagggggctactatttcccctacccagttccctac
agagacatggctatgtatccagaagagatgttccacagagatccatactctcaaagcgga
gactttgaccaggatttagtgatgtcgggacgatctaggagtcagtgtcgtgtcatggct
gagcggatgatacaagagtcgctctctttggatagccagctaagtgaattagtggcaaga
cggttgtcaagcaaggacttcacaacactgacccaaatcagacaagacctgcagtctaag
tgtgaacaggtcatcctacttgaccttgacgttgctaacaaacacaacgctgagcagctc
ctgtggaaatcagtgtactaccaagtcatagaggtgctcaggaaaaacctgtctgaggag
aaggacgaggagactaaggcccagctcacacaaatactgaatcagggaacagaattttat
gaacgtcttctacagaaacttcagcagacatttaacttccaattggaggcatttttggac
tccagtgtcttaccaccagacaacatatctcgaactgtcaaactcgcattgttaagtact
cagaggaccctgatctgccttggggacatcgctcgctaccgagagcagagcaacgacacg
gggaaggtcaactatggcagggcgagaaattggtactccaaggctcaacagatcgcccct
aaaaatggccgtccatacaaccagctggctatactggctctctacactaggagaaagctg
gatgctgtgtactattatatgaggagtttggcagctagtaatccattcttaacagctcgg
gaaagtcttatatcactgtttgatgaggcgaggaagaaggcccagaactctgagaaaaaa
cgtgaacaagagaaagaaaagacgaggcagctgagacaacaaaagcgtcaacaaggggag
agaatcgaggtgtgggtgtcgtcggacggtaccagtactgagaacaacgatgacgagggc
acagaccaggacttgtctaaactggacgctgtagagctgaataaaagatttgttctaagt
tttctcaatgtacatggaaagcttttcacaaaagttgggagagaaacatttcctgaatgc
tgcgcccagatgctgaaggaatttgatgcattgctcagacgaggggcaataggtccgaca
cgactgcttcagctcatggctatcaacatgtttgccattgacaacacagccttgaagaca
ccagtatcgccctctgacccaggctctggcctgttgagatcagagctccaggagcaggct
gtacagcttggtttggatatgtttggtatcctagtccgtcggtgttctgagcagctgaag
gaacacctggtgtctaatgattaccctgcccacatgtttagtcgtgaactagaggaacag
gtgcctgggatcaaggtgtggaccgattggatgtactgtaacccaacgttatggaatcca
cccccaaatatacacgagttcaccctcggtcctgatgtagatgtgtggcagtcttgtgct
gacctgtgtaatatattacggaatgtggacacatcgcacgtcaaactctacagggagaag
aaagaaggttgtgatcctgttatcctacatgaagataacatgctggccggatttgtaccg
ctacttagtcttccaatcaaattccactacgttcacagtaccgttaccaaggagatagcc
caggactgctgtaggattgagaagctccaggactttggtgactacttgtgtggtatcccc
acgcctatgttgtcatttgatgtggagaaaaaacaatactactctgtagcaccacctact
ggcttctctgatgatgagaaagaggacgtgaaatctgagggtcatctctcaggagaggaa
gatgtaatcgtggaaagtgagtcagaggagataacaggagaggacgacgaacacgtgaga
cacttacgtgagaaaaaggaggaactgaaacgcatcaaagaggaacagaagaagcagaag
gagacctttcagaagatcatagataagaacagacaccacctgatagagttagagatccat
ccaatcttcctggtacccgacaccaactgttttatagaccatctgagtagtatacagaaa
ctcatacaacatcagaaatatacagtgaccatcccacttatagtgataaacgagttggac
ggtttagctaagggcagtaggatgggacagtacgacagccaggaacatgctaataaggtg
aagaaaagtgcggaggaaaccatcaagtatctggaggcagagttccagaagaaaaacaac
agcctccgagctcaaacctcaaagggaaacatcatggaaaccatctcattcagaagcgaa
gagacagaaacagatgctggaaacaatgatgacctgatattatcctgctgtctccactac
tgtaaggacaaggcgcgagacttcatgaccaaagataaagatgcaccgatccgtctctac
agagatgttgtactgctaacagatgatcgcaatctacgtctgaaggctcacacttacaac
gtacctgtcaaagatgtcccttcattcatacaatggagcaaggtcacttga
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integrated database retrieval system
