Argopecten irradians (bay scallop): 138332304
Help
Entry
138332304 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138332304
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
airr01002
]
138332304
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138332304
03029 Mitochondrial biogenesis [BR:
airr03029
]
138332304
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138332304
Peptidases and inhibitors [BR:
airr01002
]
Peptidase inhibitors
Family I32: IAP family
138332304
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138332304
Mitochondrial biogenesis [BR:
airr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
138332304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
zf-C3HC
Prok-RING_4
zf-RING_5
DUF2039
Zein-binding
Motif
Other DBs
NCBI-GeneID:
138332304
NCBI-ProteinID:
XP_069136447
LinkDB
All DBs
Position
1:complement(51755927..51767619)
Genome browser
AA seq
803 aa
AA seq
DB search
MNSNTYSATDSSRHAVKSTYDFKRPLSKKPESNQGKTQEGNTSLRMVMRKMPLDISGNDA
TFRTIQTKIEMTKRANAFRLSIDVSPKATYVALTVSNNGFSDNNKLPTSNEDDSAHHSLF
IANQHDIPNSTYVGYTEVKTTEIHNVDDKDDDIDARENDVDDDTHCDNDWMVYMSKHQDH
VYVKRSDHRIMSCKNAILTQKTSECPRNRKITNVKVQEVILKYALAEFEKNGCFEQSQKL
SGRHVHIPRQQEYKLRLPQMTPVPLYPNDRNEQININPFFPLLNSFGQWPNESEISPSQL
AEAGFHCEENGNTVGCRSCGIKLTVEDFNGNDPKIVHRQRSPTCPAAHRENNSFVQQETT
GRTNISDVEAAYRDMHLTISGNNVNRRNDLAQIDVINEEHHERRQRNASSASNNIDEDGY
GAGAAASAASGAPASATSPPPLTYQPRNPNQISTEVRRETFRNWPGRTQDIDNLVSAGFF
YTGESDIVRCFHCDIGLAEWDPTDDPWVEHARHSPDCPHLRSERDGRFISEIQRSWAEIY
TPKHSQMSETNARLQTFSNWPRDFVVQTPEQLAAAGFFYTGVTDTVRCHYCDGGLREWEP
NDDPWTEHAKWFPFCKFVIKVKGLSFIQAAAPIEESDGEEDNPVGVTSPPSRPTPSYEER
CRKKDIEKPMMSAAVESVKDFGYGRKMIKKAILLHVETSGKREFNAKELMDMIFKLQENE
ASYEMDGSDSCSSSDEINLTPKAMAKENEYLKSKQLCDHCQTRDKRVVFRPCGHISMCES
CAETQKRCTVCSKEVKSRLKIYI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaacacatattctgcgacagacagcagccgacatgctgttaaatcgacatat
gactttaagcgtcctctcagcaagaaaccggaatccaaccaaggaaaaacacaagaggga
aatacatctttacgtatggttatgaggaaaatgccattagacatcagcggaaatgatgca
acgtttagaactatccagacaaaaattgaaatgacaaaacgggcgaacgcattcagatta
tcaattgatgtttcaccaaaagctacctatgtagctctgacagtcagtaacaatggattc
agtgacaacaataaactacctacttcaaatgaagacgacagcgcacatcactctctattt
attgcaaaccaacacgatataccgaatagtacatatgtcgggtacactgaagtgaaaaca
acagagatacataatgtagatgataaggatgatgatattgatgcaagagaaaacgatgtc
gacgacgatacccattgcgataatgactggatggtatacatgagtaaacatcaggatcat
gtttatgttaaaaggtctgaccatcgtatcatgtcttgtaaaaatgctatccttactcag
aaaacctcagaatgtcccagaaaccggaaaattacaaatgtcaaagtacaagaggtgatt
ctgaaatacgcattggcagagttcgaaaagaacggatgttttgaacaatcacaaaaatta
agtggtcgacatgtacatattccacgacagcaagaatacaagctccggttgccgcaaatg
acaccagttcccctctatccgaatgataggaatgaacaaataaatatcaatcctttcttt
cctctactaaacagcttcggtcaatggcctaacgaatcagagatatcaccatctcaactg
gcagaagcaggattccactgcgaagaaaatgggaatacagttggttgtcggtcttgtgga
ataaaactgacggttgaggatttcaacggaaatgaccccaaaatagtccacagacaaagg
tcacctacgtgtccagcagcacacagagaaaacaattcatttgttcagcaggagacgaca
ggtcggacgaacatcagcgatgtcgaagcggcttacagagacatgcaccttaccatttct
ggtaacaatgtgaacagaagaaatgatttggcgcaaatagacgtcatcaacgaagaacac
cacgaacgaaggcagcgtaatgctagtagtgcaagtaacaacatagatgaagacggatat
ggtgcaggagcagcagcttcagccgcatccggagcaccagcatctgctacaagtcctccg
ccactcacttaccaaccacgtaaccccaatcagatatcgacggaggttagacgagagaca
tttagaaactggcctggaagaactcaggacatcgataacttagttagcgctgggtttttc
tacacaggtgaaagcgatatagtccgatgtttccattgtgacatcggtctggcggaatgg
gatccaactgacgatccttgggttgagcatgcacgtcacagtccggactgccctcaccta
agaagtgaacgtgacggacgatttatctcagaaattcaaaggagctgggcagagatatac
acacctaaacactcgcaaatgagcgagaccaatgcgagacttcagacttttagtaattgg
ccacgtgacttcgttgttcagacaccagaacagttagctgcggctggcttcttttataca
ggtgtgacggatactgtccgatgccattactgtgacggaggtctgcgggagtgggaacca
aacgacgatccatggacagaacacgcgaaatggttccctttctgtaaatttgtcatcaag
gtgaaaggcctgtccttcatacaagcagcagcccctatagaggaaagtgacggggaggaa
gataacccagttggagtgacatcaccaccttcccgacccactcctagctatgaagaaaga
tgccggaaaaaagacatagagaaacctatgatgtctgcagcagtcgagagcgtgaaggac
tttggctacgggagaaaaatgataaagaaagcgatacttctacatgtggaaacatcaggt
aaacgtgaattcaacgctaaggagttgatggatatgattttcaagcttcaggaaaatgag
gcatcatatgaaatggacggatcggactcctgctcaagttccgatgagatcaatttgact
ccaaaagcgatggccaaggagaatgaatatctgaagtcaaaacagctctgtgatcattgc
caaactcgagacaagcgtgtggtgttcaggccttgtggccacatatctatgtgcgagtca
tgtgcagaaacacagaaaagatgtaccgtctgttccaaagaagtgaagtcacgtctgaag
atatacatttag
DBGET
integrated database retrieval system
