Argopecten irradians (bay scallop): 138335235
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Entry
138335235 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138335235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
airr04054
]
138335235
04090 CD molecules [BR:
airr04090
]
138335235
Pattern recognition receptors [BR:
airr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
138335235
CD molecules [BR:
airr04090
]
Proteins
138335235
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_5
LRR_Zer-1
LRR_LRWD1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
138335235
NCBI-ProteinID:
XP_069140327
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All DBs
Position
11:complement(29318565..29324492)
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AA seq
826 aa
AA seq
DB search
MADTTISTLLTFCTLWIFRSSDALPVCCNTSEMPGETHVICSGCRLFVVPKDLPPNTTVL
DLSNNNFTSLERGSFPDLQLLTILYLQRNKLVRITSGAFDNVPNIEELDLTHNKLEQLSM
DIHVFEALKKLKTLKIQRNNFHISKVYPGQALXAISNLEFLSIDIFEGFVFGKGFLNQIY
LSNIYLSFQGSGTVSLLNDSFHGIKRSDIKALSITAPFQKIETNTLAPFGNLITLMWRTL
ASTLTIHDAIQGLYGVRERTMDSLSIIGFRHIYTTGEDLMKSDMFNMGTICLKKLHLISN
AISTIDTDAITAWTTKTCIEELDVSDNMFYLPQSLITLGLFRSLTRLRATYTKMSIHLKR
STFSRERTYFLPTNLTYVDITDSSLSGSLFNMTIAKNNLTVLKIGHSKKFFSCYYAVVKG
LTHLKELDISGVDCSEVHPNMFAEMPLLSRLTAKQCNIEHVLSRNTPAIFKGLQNLSFID
LSSNNLHFLHKHLFADQKKTLKHLILSGNLMDRIPTEVLHNLTVLENLDISNNFITTLNY
SQYTFLDEMKIKSNDFQIVLHGNPFVCTCENLDFLSWVEASNVIYKKRELLCMTPKGIEV
PLAELLETFEQFKEHCVSQTWLIVSVTITFIFFMLGILTREAWRRSVWLRLLCRNPTEAT
KYTNDIYISYCDEDYSWVRNTLAPRLDEQKIEYCCEDKTFIPGRGIADNIMDAIDSSRQT
VFVVSYASLEREWTTFAMRLTYEYSFRVGRENLNIFILLNNIKKSEFPKLIRNKWTIIRP
LRWPNKSNTTLDKLTGAQTKFWERLSSQMLRRNSEFKSKYVTETSL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacaacaatatccaccttacttacgttctgtacattgtggatattccgttca
tctgatgcacttccggtttgctgtaacaccagtgaaatgcctggagagacccacgtgata
tgttccggatgtcgtctgttcgttgtacctaaggatttacccccaaatacgacggtcttg
gatctcagtaacaacaactttacttctctagaacggggttcatttccggatctgcaactg
ttaacgatattgtatcttcaaagaaacaaactagtaaggatcacatccggagcattcgat
aacgtccctaatattgaggaacttgatctcacacacaacaaactagaacaattatctatg
gatatacatgtcttcgaagctctcaaaaagctgaagacattaaaaattcaaagaaataac
ttccatatcagtaaagtgtatccaggacaggctttgtaagccatttcaaatcttgaattt
ctttctatagatatttttgaaggatttgtgtttggaaaaggatttttgaaccaaatatat
ttatcaaatatatacctatcctttcaaggcagtggtaccgtgtctttattaaatgattca
tttcacggtattaaaagatcagatataaaagcactaagtatcacagcacctttccaaaag
atcgaaaccaacacacttgctccttttggaaatcttattacattaatgtggagaactcta
gcatcaactttgacaatccatgatgccattcagggactttacggagtcagagaaagaaca
atggattcactttcaatcataggatttcgacatatctatactactggcgaggatcttatg
aaatcagatatgtttaacatgggaacaatttgtttaaagaaacttcatctgataagtaat
gctatttcaacaatagacacagatgccattaccgcatggactactaaaacatgcatagaa
gaactagatgtttcagataatatgttctatttgccacagtcacttataacgttgggtctt
ttccgttcattaactcgcctacgggcaacgtatactaagatgagtatccatctaaagcga
agtacctttagcagagaaagaacatatttcttacccacaaatcttacatatgtagacata
actgacagttcgttatcggggtctttatttaatatgactatagcaaaaaataatctgact
gtgttgaagataggtcattctaaaaagttttttagctgttactatgcagttgtcaaagga
ctaacccatttaaaggaattagacatatccggagtcgactgttcagaagtacatccaaat
atgtttgcagaaatgcctcttctatctcgacttactgcaaagcaatgcaatatcgaacac
gttcttagtcggaacacacccgcaatattcaaaggacttcaaaatctatccttcatcgat
ctttcatcaaataacctgcatttcctacataaacatctgttcgcagatcagaagaaaact
ctcaaacatctaattctttctggaaatctcatggaccggattcctacagaggtattacac
aatttaaccgtattagagaatcttgatattagcaataacttcataactacattaaattat
tcccaatatacgtttcttgatgaaatgaaaatcaaatcgaatgattttcaaatcgtgtta
catgggaatccgtttgtatgtacctgtgaaaatctagatttcctatcctgggtagaagca
tctaatgtgatatacaaaaaacgagaacttttatgtatgacgccaaaaggaattgaggta
ccgctagcagagttactggaaacttttgagcaattcaaagagcattgtgtttctcaaacg
tggcttatcgtttctgttactataacttttatattctttatgcttggtattctaacaaga
gaggcatggcgacgtagtgtgtggttacgactgttgtgccgcaatccgacggaagctaca
aaatacacaaatgatatatatatctcctattgtgacgaagattacagttgggttagaaac
acattagcgcctcggttggatgagcaaaaaattgaatattgctgtgaggataaaacattt
ataccaggtagaggcatagctgataacatcatggacgcgatagactcatcacgtcaaact
gtatttgttgttagctatgcttctttagaacgagagtggacaacatttgctatgagatta
acttatgaatactcatttcgtgtcggacgagaaaatttgaatattttcattttgttaaac
aatattaaaaagagtgaatttcctaaacttatccggaacaagtggacaatcattcgtcct
ttacgatggccaaataaaagtaacacaactttggacaaattgactggagcacaaaccaag
ttttgggagagattgtcaagtcagatgttaagacgaaatagtgaatttaaatctaaatat
gtaacagagacatctttataa
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