Argopecten irradians (bay scallop): 138335305
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Entry
138335305 CDS
T10542
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase-like
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr00450
Selenocompound metabolism
airr00970
Aminoacyl-tRNA biosynthesis
airr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
138335305
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138335305
Enzymes [BR:
airr01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
138335305
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Gene cluster
GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Pyridoxal_deC
DUF5767
Motif
Other DBs
NCBI-GeneID:
138335305
NCBI-ProteinID:
XP_069140428
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Position
11:complement(31478828..31489600)
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AA seq
495 aa
AA seq
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MDSDCYKLCEKLIPDTYVQQGQQAKHVHQNKIRHLLEQKKLPEEGWSDLTIEILLQEFSV
MDSNNFPGNCGVGEREARVFSPLVLKRHYNFGHGIGRSGEITAIQPKAAGSSLIMKLTNS
LALDLIKLSGVSSVKSCFVVPMATGMSMVLSMLTFRQSRPNAKYVIWPRIDQKSCIKSII
TAGLTPVVIENTLEGDELRTDVQAVRDKVTELGASNILCIFTTTSCFAPRAPDRLEEIGQ
ICKVNDIPHLINNAYGLQCTKCTHLIQQAARTGRVDVFVQSTDKNFMVPVGGSIIAGLDV
KLLEQISKTYPGRASMSPTMDLFITLLSMGSQGYKALVKQRKEMYSYLHTSLSKCAAKHG
QKLLNINHNHISMAMTLMVEGTSATDIGSKLFTRCVSGTRVIAPTGKISDINGQKFSNFG
AHSDAYPCSYLTAAAGIGMTKEDVDTFISRLDKVLSKCKLVPYNSVGKSVTDGREDQPSS
KDDNSDKDMQGSNES
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgactgttacaaactttgtgagaagttgataccagatacatatgtccagcag
ggacaacaggccaaacatgtccaccaaaacaagatcagacatcttctagaacagaaaaag
ttgccagaggaaggatggagtgaccttactattgaaattctcctccaagagttttcagtg
atggatagcaacaattttcctggaaattgcggagttggggagagggaagcaagagttttc
tcccctttagtgctaaaacgacattacaattttggtcatggaattggtcgatcaggagaa
attactgccatacaaccaaaggctgcggggtccagtctgataatgaaattaacaaacagt
ttggctctcgacctcatcaaactctcaggtgtttcctccgtgaagagttgttttgtggtg
cccatggcaacgggtatgagtatggtgctctctatgctgaccttcagacaaagtcgacca
aacgccaagtatgtcatatggccacgtattgaccagaaatcctgtattaagtccattatt
actgcaggacttaccccagtagtgatagagaacacactagaaggagacgagttgaggaca
gatgtacaggcggtccgtgataaggtgactgagctgggggcctctaatatcctctgtatc
tttaccactaccagttgcttcgcacctcgagccccagacagactagaggagataggacag
atatgtaaagttaacgacattccacatcttataaacaacgcctatggtctgcaatgtacc
aagtgtacgcaccttatacagcaggctgctaggacagggagagtagatgtttttgtccag
agtacagacaaaaactttatggtacctgtcggaggctccattatagctggacttgatgtt
aaactactggaacagatcagcaaaacctaccctgggcgagcgtcaatgtcaccgaccatg
gacctgtttattaccttactcagtatggggtctcaaggctacaaggctctggttaaacag
aggaaggagatgtatagctatctacacacatctctatcaaagtgtgcagccaaacacggg
cagaaactcctcaatataaaccacaaccatatatctatggccatgactctaatggtagaa
ggaaccagtgctactgatataggctccaagctgtttacacgctgtgtctcaggaacaagg
gttatagctccaacagggaagataagtgacataaacggacagaaattctcgaactttggt
gcccattcggatgcttacccctgctcctacctaactgcagcagctggcattggaatgaca
aaagaagacgtagatacatttatatctagattggataaagtgttatcaaagtgtaaactg
gtgccttacaactctgtcggcaaatctgttacagatggaagagaggatcagccatcaagt
aaagacgacaacagtgataaagacatgcaaggatctaatgagtcttag
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