Achromobacter insolitus: BUW96_18965
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Entry
BUW96_18965 CDS
T04671
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ais
Achromobacter insolitus
Pathway
ais03030
DNA replication
ais03410
Base excision repair
ais03420
Nucleotide excision repair
ais03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BUW96_18965 (ligA)
03410 Base excision repair
BUW96_18965 (ligA)
03420 Nucleotide excision repair
BUW96_18965 (ligA)
03430 Mismatch repair
BUW96_18965 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ais03032
]
BUW96_18965 (ligA)
03400 DNA repair and recombination proteins [BR:
ais03400
]
BUW96_18965 (ligA)
Enzymes [BR:
ais01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BUW96_18965 (ligA)
DNA replication proteins [BR:
ais03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BUW96_18965 (ligA)
DNA repair and recombination proteins [BR:
ais03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BUW96_18965 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUW96_18965 (ligA)
MMR (mismatch excision repair)
DNA ligase
BUW96_18965 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BUW96_18965 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
Nlig-Ia
BRCT_2
Zn_ribbon_NUD
Phage_gene29
Motif
Other DBs
NCBI-ProteinID:
APX76733
UniProt:
A0A6S7FCY6
LinkDB
All DBs
Position
complement(4152521..4154629)
Genome browser
AA seq
702 aa
AA seq
DB search
MSGASGGENPAQAAARLRAEIEQHNVRYYVYDDPSISDAEYDGLMRELQALEAEHPELVT
PESPTQRVGAAPVSAFGSVRHVVPMLSLGNAFDEEDVLAFDRRVTDTLRGAGLLGPAQEA
DYFCELKLDGLAISLRYENGRLVQAATRGDGQTGEDVTSNIRTIKAIPLQLKGSFPQVLE
VRGEVLMNRADFEKLNQAQAKRDEKVFVNPRNAAAGSLRQLDPRITAKRPLRFFAYGWGE
VQGLAGTQGGLFAEASAGAAQASQLPEKSHGAMLDWLASLGLPVNVKHNHRASGAEGLMA
FYAKVGQLRAELPYDIDGVVYKVDSLPAQKVLGFVARAPRFALAHKFAAEEATTTLLDIE
VQVGRTGAITPVARLKPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVL
APVLDKRPDDAREFVMPTACPVCGSAIERLEDETIARCTGGLFCGAQRKQTLWHAASRKA
LDIEGLGEKLVDQLVDSGRVKTLADLYSLRPLELVGLDRMGQKSADNLVAAIDKARAPAL
SRLLFALGIRHVGETTARDVARHFGSIEAIMDADEDALSSVPDVGPVVAASIRRFFAEQH
NRDVIEQLKAQGVNPVAEAAPQGTTLAGKTFVLTGTLPNWTREEASMRIQAAGGKVSGSV
SKKTAYLVAGEDSGSKLTKAQELGVAVLDEDGLKALLGEQGG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcgtctggcggtgaaaacccggcgcaagccgcggcgcgcctgcgcgccgag
attgaacagcacaacgtccgctactacgtctacgacgatccgtcgatatcggacgccgag
tacgacgggctgatgcgggaactgcaggccctggaggccgagcatcctgaactggtgacg
ccggagtcccccacgcagcgcgtgggcgcggcgcctgtctccgcctttggcagcgtgcgc
catgtggtgcccatgctctccctgggcaatgccttcgacgaagaggacgtgctggctttc
gaccgccgcgtgaccgacacgctgcgcggcgcgggcctgctggggccggcccaggaagcc
gattacttctgcgagctcaagctggatgggctggcgatcagcctgcgctacgagaacggc
cgcctggtgcaggccgccacgcgcggcgatggccagacgggcgaggacgtcacctcgaac
atccgcacgatcaaagcgattccgctgcagctcaagggctcatttccgcaggtgctggaa
gtccgcggcgaagtactcatgaaccgcgccgactttgaaaaactgaatcaggcccaggcc
aagcgcgacgagaaagtcttcgtcaatccgcgcaatgcggcggctggcagcctgcgccag
ctggatccgcgcatcaccgccaagcggccgttgcgcttttttgcctatggttggggcgag
gtccagggtttggcgggcacacagggcggcttgttcgccgaggcatcggcgggcgcggcc
caggcgtcgcagttgcccgaaaaatcccatggcgcgatgctggactggctcgcttcgctg
gggctgccggtgaacgtgaagcacaatcaccgcgccagcggcgccgagggcctgatggcc
ttttacgccaaggtcggacagttgcgggccgaactgccctacgacatcgacggcgtggtc
tacaaagtggattcgctcccggctcagaaggtgctgggtttcgtggcgcgcgcgccgcgc
tttgcgctggcgcataagttcgccgccgaagaagccaccaccaccttgctcgacatcgaa
gtgcaggtgggccgcactggcgccattacgcccgttgcgcgcctgaagccggtgttcgtg
ggcggagttaccgttaccaacgccaccctgcataacgaggacgaaatccgccgcaaggat
gtgcgcatcggcgacacggtcatcgtgcgccgcgcgggcgacgtgatccccgaggtgctg
gcgcccgtgctcgacaagcggccggacgatgcccgcgaattcgtcatgcccacggcctgt
ccggtctgcggttccgccatcgaacgcctggaagacgaaaccatcgcgcgctgcacgggc
ggcctgttctgcggggcgcagcgcaagcagacgctgtggcacgccgccagccgcaaggcg
ctggacatcgaaggcctgggtgagaagctggtcgatcagttggtcgacagcggccgggtc
aagaccttggcggatctttacagcttgcgcccgctggagctggtgggcctggaccgcatg
ggccagaagtcggccgacaatctggtggcggccatcgacaaggcgcgcgcgccggcgctg
agccggttgctgttcgcgctgggcatccgccacgtgggcgaaaccacggcgcgagacgtg
gctcgccatttcggcagcatcgaggccatcatggacgccgatgaggacgccctgtcctcg
gtgcccgatgtcgggccggttgtggcggcgtcgatccgccgcttctttgccgagcagcac
aaccgcgacgtcatcgaacaactgaaagcgcaaggagtgaacccggtagccgaggcggcg
ccgcaaggcacgaccctggccggcaagacctttgtgttgaccgggacgctgcccaactgg
acgcgcgaagaggcctccatgcgcatccaggcggcgggcggcaaggtcagcggttcggtg
tccaagaaaacggcctatctggttgctggcgaggattccggcagcaaactgaccaaggcc
caggaactgggcgtggccgtgctggacgaggacgggctgaaggccctgctgggcgagcag
ggcggttga
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