Anneissia japonica (feather star): 117125467
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Entry
117125467 CDS
T08613
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117125467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajc03400
]
117125467
Enzymes [BR:
ajc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117125467
DNA repair and recombination proteins [BR:
ajc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117125467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
117125467
NCBI-ProteinID:
XP_033127854
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MASPISVAGRIPFSELAVFLENVQKKHGTDNKRKLFKDFLDKWRVFHAHLHKDDSDNTDT
FYPVMRLLLPQLERERLAYGIKEHTLAKLYIEILGLSKESQDAKKLINYRAPTAKQEAGD
FASVAFFVLRNRCPEKGSLTIKEVNDSLDGIASNNAANKKDVVKKNLMHLLRNTSATEQK
WLIRMIMKEMKVGLSQSSIFSVFHQDAEEYFNVTNSLAKVCKDLMNPESRMNEIAIEVFS
PFSPMLGMRATLSQVEKLMDHKPFFIETKVDGERMQLHKDGDKYKYFSRRSHEYSNVFGE
NSFSGTFTQYAAKYFKSDVKSCILDGEVIAYNPETKAFMSKGENFDVKSMRDTDLQVCFI
VFDILLLNGQKLANKPFRERFNFIPKVFTPKEGRLEIVQRQAASTKKDVVDALNKAIDDR
EEGIVVKNPDSTYRPDKRKGSGWLKIKPEYMDNMMDELDLLIIGGYFGKGKRSRVISHFL
LGVAVPPSKQGDEPKLFKSFCKVGSGYTYKELYDLNVKLMPHWKPLEKDKYPEHLLLSNE
KPEIWIEPSKSVIVQVKATEITYAKDYKTGCTLRFPRVEKLRDDKAWNQCMTADELDNLK
KLADGKLASRHAVHDDDNQDIQPQVKKRKVTSRVEQKASVAERFRGADTSSLKQISKLFE
DMEFCIFNGPSDYPKVELEKKVVEHGGKITQNPSVDTYCVIAEKINVKVQNVISSGEQDV
VQASWLIDCLKTKRRLPWLPHHMIHKSHETAAYFEVHYDSHGDSYTEDVTVDKLQEIFEN
IGKQVTSLSGGNCRLSTLEIAQIEHEYFPDESPLGLFRLCRVYMDKNLIIDDPTTEIKDS
TLEMVALEMRFHGATLVDVLDDQVSHIVFDKSDLTRLKEFRNLNHDLQKKRHLVSTAWVK
SCVEDKRLKRERDYEPDAPV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccctatatctgtagctggtcggataccattctcagagcttgcagtatttctt
gagaatgtgcagaagaaacatggaactgacaacaagaggaagctgttcaaggacttcctt
gacaagtggagagtctttcatgcacatttgcataaagatgattctgataatacagatacc
ttctaccctgtaatgcgtctcttactcccacaattagaaagagagagacttgcatatgga
atcaaagagcacacactggcgaagttgtacattgaaatacttggattgtccaaagaaagc
caggatgctaagaagctgataaattacagagcacctacagctaaacaagaggcaggtgat
tttgcaagtgtggcattttttgttctgaggaacaggtgtccagaaaagggcagtttgaca
ataaaagaagttaatgacagtctggatggtattgcttcaaataatgccgcaaataaaaaa
gatgttgtaaaaaagaacctgatgcaccttctacgaaacacaagtgcaactgaacagaaa
tggcttatcagaatgattatgaaggagatgaaagttgggttaagtcagagctctatcttc
tctgttttccatcaagatgcggaggagtatttcaatgtgacgaatagcttagcaaaggtt
tgcaaggacctaatgaatccagagtctcgtatgaatgaaatagccattgaagtcttttct
ccatttagcccgatgcttggaatgagagctactttgagtcaagttgagaagctcatggat
cataagccattttttattgaaacaaaagtagatggtgaacggatgcaactccacaaggat
ggtgacaagtacaaatacttctcaagaagatcccatgaatacagtaatgtgtttggtgaa
aattcattttcaggaactttcacacaatatgctgctaagtatttcaaaagtgatgtgaaa
tcatgtatcttagatggggaagtgattgcctataatcctgaaacaaaagcatttatgtca
aaaggagaaaattttgatgttaaatcaatgagagacacagatcttcaagtatgtttcatt
gtatttgacattctgttgctgaacgggcaaaagcttgccaacaaaccttttagagaacgg
tttaattttattcctaaagtgtttacaccaaaggagggacgtcttgagatagtacaaaga
caagctgcatcaactaaaaaggatgtagttgatgctttgaacaaagctattgatgatcga
gaagaaggaattgttgtaaaaaatccagactcaacctacagaccagataagcggaaagga
agtggctggctcaagattaaacctgagtatatggataacatgatggatgagttggatctt
cttatcattggtggctactttggcaaagggaaacgttcaagagtgatttctcatttcctg
cttggtgttgcagttcccccatcaaaacaaggtgatgaaccaaaactgttcaagtctttc
tgcaaggttggttctggttatacatacaaggaactttatgaccttaatgtaaaattaatg
ccccattggaaaccactggaaaaggacaagtacccagaacatctgctgctatccaatgaa
aaacctgaaatatggattgagccttccaaatctgtaatcgttcaagtaaaggcaacagaa
ataacatatgcaaaagactacaagactgggtgtactttacgttttccacgtgtagagaaa
ctgcgggatgacaaggcatggaaccagtgcatgactgcagatgaactagacaatttaaag
aagttagcagacggtaaattagcttccagacatgctgttcatgatgatgataaccaggac
attcaacctcaagtaaagaagagaaaagttacctcccgagtagaacaaaaggctagtgtg
gcagagagattcaggggtgcggacacttccagtctcaaacagatctccaaactgtttgaa
gatatggagttttgtatcttcaatggaccaagtgattatccgaaagttgaacttgaaaag
aaggttgtggaacatggaggcaaaatcacgcaaaatcccagcgtcgacacttactgtgta
attgctgagaaaatcaatgtcaaagttcaaaatgtcataagttctggtgaacaagatgtt
gtacaggcatcttggttaattgactgcctgaaaactaaacgtaggttaccatggttacca
catcacatgatacataaatcccatgagactgctgcctattttgaggtgcattatgactct
catggagacagctacactgaggatgttacagttgacaaactacaagaaatatttgaaaac
atagggaaacaggtgacatctctttctggcggcaattgcagattaagtactttagagatc
gctcagattgaacatgagtattttcctgatgaatctcctttgggtttgtttcgtctctgc
agagtctacatggacaagaatctcatcattgatgaccctaccaccgaaataaaagacagc
acattagagatggttgccttggagatgaggttccatggtgcaactcttgttgatgtacta
gatgatcaagtatctcatattgtgtttgataaaagtgacttgacaagattaaaagaattc
cgaaatttgaaccatgatctgcagaagaagcgtcacctggtttcaactgcttgggtgaaa
tcatgtgtagaagacaaaagattgaaacgagaaagagattatgagccagatgctccagta
tga
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