KEGG   Histoplasma mississippiense: HCAG_06877
Entry
HCAG_06877        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
aje  Histoplasma mississippiense
Pathway
aje03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCAG_06877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_06877
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     HCAG_06877
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_23 AAA_15 AAA_25 RsgA_GTPase AAA_16 FtsK_SpoIIIE AAA_27 MMR_HSR1 ORC-CDC6-like AAA_28 PduV-EutP Dynamin_N DLIC
Other DBs
NCBI-GeneID: 5445433
NCBI-ProteinID: XP_001539272
UniProt: A6R986
LinkDB
AA seq 267 aa
MQSPHPPRFLVRNLSYNFADGAVGLTDVSFDLPSGSRTLLIGANGAGKSTLLRVLSGKRL
APHGTVQIGGVDPFTTGLESVTYLGVEWVLNPIVHTDIDVPTLLASVGGDAYPDRRDQLI
QILDIDLNWHMHAVSDGERRRVQLAMGLLRPWTLLLLDEITMDLDLLSRSEFLGFLKRET
EERECTIVYATHILDNLSRWPTHLVHMHLGRVIDWGPVEKFQVGRLASPSEDSRLGEVVL
EWLKRDLRERGPRPGLPGEGKKIAVEF
NT seq 804 nt   +upstreamnt  +downstreamnt
atgcaaagccctcatccccctcgattccttgtccgcaacctcagttacaacttcgcagat
ggcgctgttggcctgactgatgtctctttcgatctccctagcggcagtcgaaccctatta
attggcgccaacggtgccggaaaatctacccttctccgagtcctctccggcaaacgtctc
gcaccccacggcaccgtccaaatcggcggggtagaccctttcaccacaggtctcgaaagc
gtaacctacctgggcgtggaatgggttctaaacccaatagtccacacggacatagatgtg
cccactctcctagcctccgttggcggtgacgcctacccagatcgccgcgaccaactcatt
caaatcctcgatatagacctcaactggcacatgcacgcagtctcagatggggaacgccgc
cgtgtgcaacttgccatgggtcttttgcggccctggaccctcctcttactggatgaaatc
acgatggatctggatctgttgagccggagtgagtttctgggatttctgaagcgggagacg
gaggagagggagtgtacgattgtgtatgctacgcatatcttggataatctttccaggtgg
ccgacgcacttggtacacatgcatttaggtcgggtgatagattggggtcccgttgagaaa
tttcaggtgggcaggctggcttcgccgtcggaggatagtcggttgggggaggtggtgttg
gagtggttgaagagggatttgagggagcgaggaccgcgcccaggtctaccaggagaggga
aagaagatcgcggttgaattctga

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