Apostichopus japonicus (Japanese sea cucumber): 139959582
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Entry
139959582 CDS
T10891
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139959582
Spliceosome [BR:
ajj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
139959582
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
139959582
NCBI-ProteinID:
XP_071813401
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All DBs
Position
19:3671370..3718899
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AA seq
2071 aa
AA seq
DB search
MDRNKVPGKDRRRGMPAGEMIALGPKRRPESSTEVSRSATPPVSSAERKREAPVGMSSSS
NISIPKKPKLSSPTPLGKPSTEFPKSGKLTQSSGSTSSVPRPTSRSLDVSPRDLVEKVLD
ADAKEDDKRIDVLLCGALSSLKNSRAKPDAALFIGLMYLAKTKPMLFETETVVDAVCTLL
RRDVSVSFKSKGNPLVPILASNILMHAFLYEENWPEIFVKVYVEDAVAERVWVDHPKNQG
FVANIITAFGTKPIPKHLSVMVDPSRGASTPTEGAGGGGGGSPLRSEDMDVDMISSFGSE
DKGDSPTDSVMNRFTLIKERVETYIVSNLRDQLTRRQGLDIPRTLLRLLATACGLIEVRL
MAAPKLELWLQNPKLTRPAQELLLSLCINCCTHTSKDVEVIGMLIKMRVKTKPIINHYLL
SVRQLVAQHPENLSTFLKHTIYNELSTSRNPNNMQLLSAIFQHSPEKAAKVLATSFQSLL
LHKDDYVRAVRALFREIVKTLRYELCFSKFCLSLMQERSDSAFVDLDAAIKDRYLKANVD
VVCLTSLLSVTPQVREAVNAYTRGDKKDIAVIRKFQRQSSLIQRDSVWWMHTIVPKMFPV
AQKDFQDLLQKLLFMKPVDAYCSKDNWPPENDRSLLMSLLSEVPVEEDSLIRILIMGLTR
EIHLNPGDAIDLVDKMVKRAAVLHTDDTDSFPVLRIERLQLIDALLNSCSYHHPENISLP
EGYKPPSLAILNLYWKSWVILLILAAFNPDNIGKTGWEHYPTLRCMMEMVMTNNFKFPPA
SIASTEEATEEFRTSERQMSQLEKEEILAFENHLASVNITEKNSLLLAQLVHLNPRGLAR
RPPVQVIEQLQQLNKVIKLGHMFCKSRDPDFLLDVIHQQGTSQSMSWLSELVNSSDTSLD
MLPVQCLCEFLMNAHPESMEDASTSSSTNSEEKQREKQSQLCSRIQAILYNTEGKPETTC
EVLAYFLKKLVLLHAGQRSRSLEVLAMVISRPSEENRGKDEEPNVPSHILESHSWLLRDL
PSLPNYDAAKKLVVDSLRKAMLVETDPSTVSAYIAYLAYHFGPTELSDLVQDLAQLVVER
LTLLTFLLPKNGVSGPLTDCNLFNMLHIFSCYLQRATSSQSEGYSWSDTQDQVFLQWESG
LSATMHILVVHAMAILLTYGPPKDATNFNILLNTWFPDKSQPPSAFLVDTSEEALLFPDW
LKLRMIRSAVPKLVDAALVELEPAQLVLFVQSFGIPVQSVSKLLVHLDAAVDQMPSALER
AVASKAYMARLVEVQHMRGATGGSTFKGLLISEEPKKEPEDKKEKEPSTSKPSDRDVEMK
EVKPSGQQKQEPWTRAVCYGHLRKLLIESQVKPAEKQKICRQLQKVLMQEHKSSSTHGDG
VFSWLVEALRGFTEDDDGRASMIISLNANSNLLLALFRVILQLGIKSNHQRTLLEVITAL
QDTHCIVDSSFNKLLNHYKAKLKAVLPGSDSQSGDKMTKLNEEKKSQSVPSDVHRRLLAN
PESLFTKSAGLDSKSVKESIYPLTLLAHQTDWTVLHRCIHQLLGPNIERYNPSTVLDFLW
ACLHNPKLWQGRDTKASKRHGEEDILSLAPDQSCCIASYIAMEASSLPSLGDDDSAMLSK
IQQRLGLLIRCCSDNKDALSRVGEFLNDQINTDSPRSKWYRILLTELYLQIPEVIHYVPN
IPPQTLTAEHSSLPSGIDSFSHRLLTLLASQVTSVAGRQRKLDALAALRTLATSHPSLLM
RQLPLFAVLLQGRTHLNLRDFKGKGHINFFNHILTILQLLQPHLYQANPTDLEAIFKSYF
DLLQRYGPNKSILDFIVTKFVDILCQFYQANSSNAKSVLHNYINALNFIAQSRSDLPAIK
SLLASLSLAEETKEPEEDDPTAGPPGGGLPFREEIPGVGGREDTASPIPGILQSDVKPMT
PEDIASFQERLHKGNDPESITDALNELDSRCIGKTEFLLDFITEISNLMMSPDEECRVRA
FSLAIRLCKQQPSVSSSFLSSFVAVLQSDDGTIVQSALHHLPDFCLLSQGHAPLLLKTAF
SRGLVSNLDTAPAISETMQLLNMEAASVSAV
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaacaaagtaccaggaaaggatagacgaagaggtatgccggctggagaaatg
atcgctctgggaccaaagcgaagaccagagtcttccacagaggtctccaggtctgccacc
ccacctgtttcatcagcagaaagaaagagagaagctccagtgggaatgtccagcagcagc
aacatctcaattccaaagaaacctaagttgagtagtccaacacctctcggcaaaccttct
acagaatttcccaagagtggcaagttaacccagagcagtgggagtaccagctcagtgccc
agacccacttcaaggagtttagacgtttcacccagggatctggtggaaaaagtccttgat
gccgatgctaaagaagacgacaaaagaattgatgttctgctgtgcggtgctctcagttct
cttaaaaatagccgggcaaaacctgatgcagctctcttcattggtctcatgtatttggcc
aaaaccaaaccaatgttatttgaaactgagacagtagtagatgcggtttgtactttactc
aggagggatgtcagtgtcagcttcaagagtaaaggaaatcctctggtacctatcttagca
agtaatatcctcatgcatgcatttctctatgaagaaaactggccagaaatatttgtcaag
gtttatgttgaagatgctgttgctgagagggtatgggtcgaccacccgaagaatcaagga
tttgtggccaacatcattactgcgtttggtaccaaacccatcccaaagcacctatcagtc
atggtggacccatcaagaggtgcaagtacaccaacagaaggagcaggtggaggtggagga
ggaagcccacttagatctgaagatatggacgtggacatgatttctagctttggatctgaa
gacaaaggagactcaccgaccgacagtgtcatgaacaggtttactctgataaaagagcgt
gtggagacgtacatcgtcagtaacctacgagatcagctgaccagacggcagggtttggat
attcctcgtactttattgcggctcctcgccactgcctgcggcttgattgaagttcgactg
atggcagcaccaaagctggagttgtggcttcagaatccaaagctgaccagaccagcacaa
gagcttcttctctctctctgcatcaactgttgtactcacacctccaaggatgttgaagtt
atcggtatgctgatcaagatgagggtgaagaccaaacctatcattaaccattatttactc
tctgtcaggcaattggtggctcaacatccagagaacctgtccactttcttgaagcacacc
atctacaatgaattgtctacatcgaggaatcccaacaacatgcaattgctctctgccatc
tttcagcatagtccagagaaagctgctaaggtcctagccacgtcatttcagtctctgctg
ttacacaaggatgattacgtccgggcggtcagggcacttttcagagagattgtcaagacc
ctgcgatatgaactttgtttctcaaagttttgtttgagccttatgcaggagaggagcgac
agtgcttttgtcgatcttgatgcagcaataaaggatcgttacctgaaggccaatgtcgat
gtggtgtgtctgacatcactcctcagtgtcacccctcaggtcagagaggcagtcaatgca
tacacaaggggagacaaaaaagatatcgcggtgattcgtaaattccagcgtcaatcttcc
ctgattcagagagacagtgtttggtggatgcacacgattgtacccaagatgtttcccgtt
gctcagaaagatttccaagacttgttacagaagctgctctttatgaaacctgtggatgcc
tattgcagtaaagacaactggcctccagagaatgacaggagtttgttgatgtctctcttg
tcggaggtcccagtcgaagaggacagtcttatccgcatcctcatcatgggactgaccaga
gaaatccatctgaatccgggagatgctattgacctggtggataagatggtcaagagagca
gccgttctccatacggatgatacagacagttttcctgtcctgagaattgaacgtttgcag
ttgattgacgctctgctcaactcctgttcctatcaccatcctgaaaatatctccttacca
gaagggtacaaacctccatccttggccatcctaaacctctactggaagagctgggtgatt
cttctcatcttagcagctttcaatccagataatatcggtaaaactggctgggagcactat
ccaacccttcgttgcatgatggagatggtcatgacaaacaacttcaagttccctccggca
agtattgcatcgacagaagaagccacggaggaattcaggactagtgagagacagatgagc
cagctggagaaagaggagatcttagcctttgagaaccatcttgcatctgttaacatcaca
gagaaaaacagtctccttcttgctcagcttgttcacctaaatccaaggggcttggcaaga
cgtcctccagtacaagtcatagaacaactgcagcagctgaataaagtcatcaagctcggc
cacatgttctgtaagagtcgggatcctgatttcttgttagacgtaatccatcagcagggc
acttcccagtccatgtcttggctatctgagcttgtcaattcctctgatacatccctagac
atgcttccagtacaatgcctttgtgagttcctaatgaatgctcatcctgagagtatggaa
gatgcttccactagtagcagtaccaacagtgaagaaaaacagagagagaaacagtctcag
ctctgcagtcgaattcaagcaattctttacaacactgaaggtaaaccagagacgacttgt
gaggtgctggcatacttcttaaagaagttggtattgctacatgcaggtcaaaggtcaaga
agtttggaggtacttgccatggtcatctctagaccctcagaggagaacagaggcaaggat
gaggaaccaaatgttccatctcatatactagagagccattcctggcttctgagagatctg
ccttctctacctaattatgatgcggccaagaaacttgtggttgattcccttcgaaaggcc
atgctggttgagacagacccttctaccgtcagtgcgtacatcgcctacttggcctaccat
tttggtcccacagaattatcagatcttgtacaggaccttgctcagctcgtggtggaaaga
ttgactttgttgacattcctcctgcctaagaatggagtcagtggccctctcaccgactgt
aacctcttcaacatgttacacattttctcctgctacctccagagggctaccagctctcag
agcgaaggctacagctggtctgatacccaggatcaagtgtttctacagtgggagagtggt
ctatcagctaccatgcatatacttgtggttcatgctatggctatacttctgacctatggg
ccacctaaagatgcgactaatttcaacatcctcttaaatacttggtttcccgacaaaagt
cagccaccgtctgcattcctggtcgacacttccgaagaagcgcttctcttccctgattgg
cttaaactcaggatgatacggtctgctgtccctaagttagtagatgcagccttggttgaa
ttggagcctgctcagcttgttctgtttgtccagtcgtttggaattcccgtccagagtgta
agtaagttactggtccaccttgatgctgctgtggatcagatgccatctgctttagaacga
gctgtcgcatctaaggcatacatggcccggctggtagaggtccagcacatgaggggggct
acaggggggagcacttttaaaggccttttgatctcagaagagccaaagaaagaaccagag
gataaaaaagaaaaagaaccatcgacttccaaaccatctgacagggatgttgagatgaag
gaggtcaagccctctggacaacagaaacaagagccatggactagggcagtgtgctatgga
cacctaagaaagttgctgattgagtctcaggtcaaacctgctgaaaagcaaaagatttgc
agacagttacagaaggtcctgatgcaggagcacaagtcatcaagtacccatggtgatgga
gtcttcagttggttagtggaggctctgagaggattcacagaggatgatgatggtcgggct
agcatgatcatctctctcaacgctaacagtaacttacttctggctctcttcagagtcatt
cttcaacttgggattaagagtaaccatcagagaactttacttgaagttattacagccctc
caggatactcactgcatcgtagattcatccttcaacaaactgttaaaccactacaaagca
aaactaaaggctgtgttgccaggatccgattctcaatctggtgacaagatgacgaaattg
aacgaagaaaaaaagtcacagtccgtcccgagtgacgttcatcgtcgtttgctggctaat
ccagagtctctcttcaccaagtcggctggtctggactctaagagtgtcaaggagagcatc
tatccgctaacgttacttgcccatcagacagactggacggtcctacacagatgtattcat
caattgctcggaccaaacattgaaaggtacaacccttccacagttttggactttctctgg
gcttgcttgcacaatcccaaactttggcagggacgtgatacaaaagcatcaaagaggcac
ggagaggaggatatcttgtctctggctccggaccagtcttgctgcatcgcatcttacatc
gccatggaagcatcaagcctgccctcactcggtgacgacgatagcgccatgctctccaag
atacagcagaggctcggtctcctgatccgctgctgtagcgacaacaaagatgccctgtct
agagtcggggaattcttgaatgatcagataaatactgacagccctaggtccaagtggtat
cgaatactgctgacagagttgtacctacaaatcccagaggtgattcactacgtgcccaac
atcccaccacagaccttgacagcagaacattccagcctgccatcaggaatagattcattc
tcccataggcttctaactctcctagcatctcaagtcaccagtgtggctggtcgtcagagg
aaattggatgccctcgcagctcttcgtactctggcaacctctcacccctccctcctgatg
aggcagttacctctgtttgcggtccttcttcaaggtcggactcacctcaacttacgagac
ttcaagggtaaaggtcacataaacttctttaatcacatcttgactatcctccagttgctt
cagcctcacctctaccaagcaaacccaacggatctagaagccatctttaaatcgtacttt
gatctacttcagcgttacggcccaaacaagtccattctggatttcatcgtcactaaattt
gtggacattctctgccagttctaccaggcaaacagcagcaatgccaaatcagtcttacac
aactacattaatgctttaaatttcattgctcagtctcgatcagaccttccggctatcaag
tctctcttagccagtctcagtctagccgaggagacaaaggaaccggaagaagatgaccca
actgcaggccccccaggaggggggcttccattcagagaggagattccgggtgtaggggga
cgagaagatactgcctctcccatcccaggcatccttcagtccgatgttaaaccaatgaca
ccagaagatatagcctccttccaggagagattgcacaaaggcaacgatccagagagtatt
actgacgctttaaatgaactagacagtcgttgcatcggcaagacggagttcctcctagac
ttcataactgaaatttcaaatttgatgatgtcaccggacgaagagtgcagagttcgagct
ttctcattggccatcagactctgcaagcaacagccaagtgtttccagcagcttcttgtct
tccttcgtggcggttctacagagtgatgacggtacaattgtacagagcgccctccatcac
cttcctgacttttgtcttttgtcacaaggtcatgcacctcttctattgaagacggcgttt
agtcgaggattggtaagcaaccttgacacggcaccagccatatctgagacaatgcaacta
ctcaacatggaagctgcctctgtcagtgcagtttaa
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integrated database retrieval system
