Apostichopus japonicus (Japanese sea cucumber): 139960860
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Entry
139960860 CDS
T10891
Name
(RefSeq) uncharacterized protein
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139960860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139960860
Enzymes [BR:
ajj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
139960860
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
139960860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AtDEF-like
Motif
Other DBs
NCBI-GeneID:
139960860
NCBI-ProteinID:
XP_071815597
LinkDB
All DBs
Position
20:complement(27863503..27879427)
Genome browser
AA seq
481 aa
AA seq
DB search
MDMYQQYQYNGYPPMPPVKQEPMDYPPPYPMDYMDMNNYQPLPPVPPPMEEPQPKVKKRK
TKQDKVTDHFKEKKPRKKIDRFKGMPEEEVAKRTLPDHLKENLDIVIIGINPGLMAAFKG
HHYAGPGNHFWKCLYLSGMTVEPLTAMDDYKLLDIGIGFTNMVERTTRGSADLTRKEIKE
GAQIMVEKIKKYRPLIACFNGKGIYEIFSGKKDFEVGRQPETIPGTDTVIYVMPSSSARC
SQFPRAQDKVQFYITLRDLRDELKAVNSNNGIPNALPSGSTSESQAAEKPSSTKISSSSS
SSSSSSVPTSKEEKVIIKEEKTDGESYKTCQSKKKCDVPCTSASSSSSVQSVPVKSEPLE
SKDYITLQPMKPMDNSFLHHNSISSFADNYPPVKQEPIDSPYSCHSSNSFLPNIKQEMSP
GSSSGSFSGPNSRQEWPTVDLGNFIDDIPPIASNAAVPVSEEDYVVQESTASQSQYTDAS
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtatcaacagtaccagtacaatggctatccaccaatgccacctgtcaaacag
gaacctatggactaccctccaccataccctatggactacatggatatgaataattatcag
ccattgccaccagttccacctcccatggaggaaccacagccaaaagtgaaaaaaagaaaa
acaaagcaagataaagtcacagaccactttaaggaaaagaaacccagaaagaagattgac
cgtttcaagggaatgcccgaagaggaagttgcaaagagaactttacctgaccacctgaaa
gagaatcttgatattgtaattattggaattaacccaggtctcatggctgcatttaaagga
caccattacgctggacctggaaatcatttctggaagtgcttgtacctctctgggatgact
gttgaacccctgacagcgatggacgactacaaactgctggatattggaataggtttcaca
aacatggtggagagaaccaccaggggcagtgctgatctcactaggaaagagatcaaagaa
ggtgctcaaattatggttgaaaaaatcaagaaatacagaccactgatagcttgctttaac
ggaaaaggtatttatgaaatattcagtggcaagaaagattttgaagtcgggaggcaacct
gagaccattcctggcactgatacggtcatctacgttatgccttcctcaagtgcacggtgt
tcgcaattcccaagggcacaagacaaagttcagttttacataacacttcgcgatctcagg
gatgaactgaaggcggtgaattcaaataacggtattccaaatgctcttccgtccggaagc
accagcgagagtcaagctgcggagaaaccctcctccacaaagatcagtagcagcagtagt
agcagtagtagtagtagtgtgcctaccagtaaggaggagaaggtgataatcaaggaggag
aagaccgacggtgagtcttacaaaacctgccaaagcaagaagaaatgcgacgtaccatgc
acgtccgcttcttcctcctcgtcggtccagagtgttccagtgaaaagtgagcccttggag
agcaaagactatattactttacagccaatgaaacccatggacaattcgtttctgcaccac
aactccatctccagctttgccgacaactaccccccggtcaagcaggagcccatcgacagc
ccgtacagttgccatagcagcaacagtttccttccaaacatcaagcaagagatgagtcca
ggtagcagcagcggcagttttagtggaccaaacagtcgtcaggagtggcctaccgtggac
ctgggtaacttcatcgacgacatcccccccatcgctagtaacgcagcggtccccgtgtcg
gaggaagactacgtcgtgcaggagagcacagccagccagtctcagtataccgatgcatcc
ttttaa
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