Apostichopus japonicus (Japanese sea cucumber): 139961025
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Entry
139961025 CDS
T10891
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ajj03037
]
139961025
Cilium and associated proteins [BR:
ajj03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
139961025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
WD40
Beta-prop_EML_2
Zn_ribbon_IFT122
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Zn_ribbon_IFT122_C
NBCH_WD40
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_NUP159_NUP214
TPR_IFT80_172
Beta-prop_TEP1_2nd
TPR_GEMI5
TPR_IF140-IFT172
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
TPR_7
eIF2A
Beta-prop_IFT140_2nd
Beta-prop_IFT80_2nd
Beta-prop_WDR75_1st
NatA_aux_su
zf-RING_2
DUF7560
Beta-prop_WDR19_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
139961025
NCBI-ProteinID:
XP_071815931
LinkDB
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Position
20:complement(2114584..2147620)
Genome browser
AA seq
1193 aa
AA seq
DB search
MRAVPTWVDKVVDRDKLEQCIYDLAFKPDGSQIVVAAGNRVLIYDTNDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSVIIWTNKLEGILKYTHNDSLQCLSFNPITHQLASCACS
DFGLWSMEQKAVSKHRCSSRITCCSWTNDGQYLAIGMYNGQISIRTKNGEEKLKFERPGG
AVNPIWKMSWNPAKGEAHDVLAVVDWGQKLSFYQLSGQKIGKDRDLAYDPCSLGFFSKGE
YMVIGGSNKQAVLHTKEGVQLGVIAEQKSWIWSCAVRPDQNFVAVGCQDGTIAYYQLIFS
TVHGLYKDRYAYRENMTDVIVQHLLTEQKVRLKCRDLVKKIAIYKNRLAVQLSDKIIIYE
LYSEDASDMHYRVKEKINQKFECNLLVVCSQHIVLCQEKRLTCYSLSGNKEREWVMEALI
RYIKVIGGTSGREGLLVGLKNGQILKIFVDNPFPILILKQQTSVRCLDLNSSRKHLAVVD
EHNTCLVYDVDTKELLFQEPNANSVAWNTQCEDMLCFSGNNQLNIKASNFPVHQQKMQGF
VVGFTGSKIFCLHVYAMTTVEVPQSAPMYQYLERKQFKDAYRVACLGVTEKDWNALAHEA
LQGLDFDTSKKAFIRVRDLRYLELIHNIEERKRRGELDDQLFLADVFAYQGKFGEAAKLY
KRAGHEQKAMNMYTDLCMFDQAKDFIGSGDPQDKKLLITKQADWAKNINEPRAAAEMYLS
AGEHLKAVEIIGDNGWADMLIDVARKLDKADREPLGKCAQYFKRMEQFAYAAETLTKMGD
TRNLILLHVESRNWEAAFTLVEKHSEFKDDVYVPYARWLAENDRFEEAQKAYHKAGQQRE
AVRVLEQLTHNAVMESRFNDAGYYFWNLSMQCLEIAGKNEENSREMLQKFQEFQSKAEVY
YVYHTIQRYTDEPFTSHQAETLFNMAKYLWHAILKEVPHGVSKVNTLYALAKQSRILQAY
KLARFAFEKLQSLRIPPRLQDTVDLGSITIRSKPFHDAEEVLPMCYRCSTTNPLLNNQGN
QCTNCSQPFVHSFSSFDVLPLVEFVLENGLSDEEAVQLIQMEPPKKRQRDQWREQSSGNM
QSMRLDDFGDAGADLEEDPFTASLMSFEQGSTEFVPVVVNRSVLQSMDRSQVVVKKWPSP
LRYQYYKSLLDDVNVTVCPSCNQTFHVEEYELLVLQNNHCPFCRRNPSEIKAD
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgttccgacttgggttgataaggttgttgacagagataaactagagcaatgt
atttacgacttggcattcaaaccggatggttcgcagattgtagtagcagcaggaaacagg
gtcttgatctacgacaccaacgatggtactctaattcagccgttgaaaggtcacaaggac
acagtctactgtgtggcttatgccaaagatggcaaaagatttgcatcgggatcagctgat
aaaagtgtcatcatttggactaataaactggaaggcattctcaagtatacacacaatgat
tccttgcagtgcctgtcattcaatccgataacacatcagttggcaagctgcgcgtgtagt
gactttggtttgtggtcaatggaacagaaggctgtatctaaacacagatgtagcagtaga
ataacttgttgcagctggactaacgatgggcagtatctagctattgggatgtacaatgga
caaatcagcatacgtacaaagaatggcgaggagaagttgaagtttgaacgaccaggtgga
gctgtaaacccaatttggaagatgagctggaatcctgctaaaggtgaagctcatgatgtc
ctggcagtggtcgactggggtcagaagctatcattttaccaactcagtggtcaaaagatt
ggcaaagatcgtgacctagcttatgacccttgctctctgggattcttctccaaaggggaa
tacatggtgattggtgggtccaacaaacaggcagtgttacacaccaaggaaggggtgcaa
ctaggtgtcatcgcagaacaaaagtcatggatttggtcgtgtgccgtcaggcccgatcaa
aactttgtggctgtcggttgccaggacggtaccatagcttactatcagctaatcttcagt
accgttcatgggctctacaaggatagatatgcctacagggaaaacatgacagatgtcatc
gtccagcatctgctcacagaacagaaagtccgtttgaaatgcagagacctggtgaaaaag
atagccatctacaagaacagacttgcagttcaactctccgataagataatcatctatgaa
ctatactcagaggatgcatctgacatgcactacagagtcaaggaaaaaatcaatcagaag
tttgaatgcaaccttctcgtggtctgctctcaacacatcgtcctctgtcaggaaaaacgg
ttgacatgttacagcttatctggaaacaaggaacgtgagtgggtgatggaggccttgatc
agatacatcaaagtaatcggaggaaccagtggacgagaagggcttttagtcggtctcaag
aacggacagatactgaagatatttgtggacaatccattccccatcctcatcctgaaacaa
caaacttctgtgagatgtttggacctgaactcttccaggaaacacctggccgtggttgat
gaacataatacctgtttggtttatgatgtagacaccaaagaattgctctttcaggaaccg
aatgctaacagcgttgcctggaatacccaatgtgaagatatgctgtgtttctcgggtaac
aaccagttgaacattaaggccagcaattttccagtgcaccaacagaagatgcagggcttt
gtggtgggcttcactggctccaagatcttctgtcttcatgtgtacgctatgaccacggtg
gaggtaccccagtcagcacccatgtatcagtatttggagcggaaacagttcaaggatgct
tatcgagttgcatgtttgggagtaactgagaaggactggaatgctctggcccacgaggcc
cttcagggacttgattttgacacatccaagaaagctttcatcagggtccgggatctacgc
tacttggaactcattcataacattgaggagaggaagcgccgcggtgagctagacgaccag
ttattcctggcagatgtcttcgcctaccagggcaagtttggcgaagcagctaagctgtac
aagagggcagggcacgaacagaaggccatgaacatgtacacggatctctgcatgttcgac
caggccaaagatttcatcggcagcggagatccgcaggataagaaactactgatcacaaag
caggccgattgggccaaaaatatcaacgaacccagagctgccgcagagatgtacctgtcc
gctggagaacaccttaaagccgtagagatcatcggtgacaatggctgggcagatatgctc
atcgacgttgctcgtaagcttgacaaggctgacagagaacctctcggtaaatgtgcacaa
tactttaagaggatggagcagtttgcctacgctgcagagactctgaccaagatgggagac
acccggaacttaattctccttcatgtggagtccaggaattgggaagcagccttcacctta
gtagagaagcattcggaattcaaggatgatgtttacgtaccttatgcccgatggctggct
gagaatgacagatttgaagaagctcaaaaagcttaccacaaggctggacaacagagggag
gcagttagagtactggaacagctgacgcacaatgccgtcatggagagccgttttaacgat
gctggttactatttttggaatctgtctatgcagtgcctggagattgctggaaagaacgaa
gagaatagtcgtgagatgttgcagaagttccaggagttccagtctaaagctgaggtttat
tatgtttaccataccatacaaaggtacactgatgaacccttcacctcccatcaggcagag
acactctttaatatggccaagtacctctggcatgccatcttgaaagaggttcctcatgga
gtcagtaaagttaacactctctatgctcttgctaaacagagcaggatcttacaggcttac
aaactggcaaggtttgcctttgagaaattgcaatcccttagaataccaccgagattacaa
gacactgttgatctaggcagcattacgataagatcgaagccattccatgatgccgaggag
gtcctaccaatgtgttacagatgttccaccaccaaccctctcctcaataaccagggcaat
caatgtaccaactgcagccaaccatttgtgcattcattttcatcgtttgatgttctacct
ctggtagagtttgtcttagagaacggtctcagtgacgaggaggcagttcaactgattcag
atggaaccacccaagaagagacagagggatcaatggagggagcaatcgtctggtaacatg
caatccatgagactggatgactttggagatgcaggggcggacttggaggaagatccattc
actgccagtctcatgagttttgagcaaggaagtacggagtttgttcctgtagtggtcaac
cgttcagttttacagagtatggacagaagccaggtagtggtcaagaagtggccgtctcct
ctgcgctaccaatactataagtctctactggacgacgttaacgtaaccgtttgcccttca
tgtaatcagacctttcatgttgaggaatacgaattgcttgtcctacaaaacaaccactgt
ccattctgccggagaaatccatctgagatcaaggcggactaa
DBGET
integrated database retrieval system
