Apostichopus japonicus (Japanese sea cucumber): 139962523
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Entry
139962523 CDS
T10891
Name
(RefSeq) biotin--protein ligase-like isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00780
Biotin metabolism
ajj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
139962523
Enzymes [BR:
ajj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
139962523
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
139962523
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
139962523
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
139962523
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
139962523
NCBI-ProteinID:
XP_071818660
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Position
21:1571672..1657270
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AA seq
840 aa
AA seq
DB search
MFSVCYTYLTVAHFWRHHRKEQAVMKALQMHGVFQSVAFRKILQGDEEGWNRKTTRASEL
CEVQDERAKFSHFSKYIEPSLGKQMVIVKPKQTVDLSKEWTSFIGSSVAPPDSSSKGSKS
PEDESSLFFLLEASPPAKDSEGKLKLRDVSSDRVVNLSDLAVPVAWKPGEPFGILVQASA
ENFSKVGTAFMEGVLELDDGLYVDQIISVEVQGHPFNLVDPLVDKDVGFSLPGNNLDESS
EFPSDGSEVKSGRQSRKKHSSQFTKRVEKQKKGTDDKGGVNGALSDSTKPPNVLIFTGDN
PQAAEIFEKATQALEGVLGRDKYVVYQLTPDQLAGHPWSENTALLVTVGQAGTAFTKEQL
DIVNDYVVVGGKLLNVGMNLAFEVGQYAAGKKSPLTPTDINYKAKNSADEVSFRAPYSSD
QIQVTSEDSSSVLVSVKGESLVVECAEDRGKVIHSRLPLVALEQVTDENAKSCLQQILAD
VLSRLQITCQPEWKLPDLTPCFLVANTPATNSAFHNSVKPLLQKSILKASPVSLFFASNL
AEAEDKVSADLLTVLSDMSPSSSAFDVDVYMKNLKSKVLGNVLMYIEVVPTTMTLFESFM
FKVPKTVGAVAVASRQTKGKGRGGNKWLSPLGCAMFTAHVQFQSGTKLGSKLPFLQHMPA
LAAVEAIRTRPGYENLDLGVKWPNDIYFGGKQKVGGVMVKSSCMGRDFHALVGIGFNVAN
SKPTLCVNDIIEEYNEKNQTDLSPLKVEEVIAWTLTVLEKMIDDFQREGHLQFCKHYYQR
WLHNDSVVHLEREDGPEVTVIGLDSSGFLEVKDKDGKLISLQPDGNSFDMLKNLIQMKKR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagtctgctacacgtaccttaccgtggctcatttttggcgccaccacagaaag
gagcaggccgtgatgaaggccctgcagatgcacggggtgtttcagagcgtggccttcagg
aagatcttacagggtgacgaggagggatggaaccggaagactacgagggcgtcagaactg
tgcgaggttcaggacgagagggcaaagttcagccacttttcaaagtacatcgaacccagc
cttggaaaacagatggtgatcgtcaaacccaagcaaactgttgacttatccaaagaatgg
acttccttcattggttcatcagttgctccaccagattcctcatctaagggcagtaaatca
ccggaagatgaatcctccctcttctttctcctggaagcgtctcctccggctaaggatagc
gaaggcaagctgaaactgagagatgtatccagtgacagagtcgtcaatctctccgactta
gccgtgccggtcgcatggaaaccgggtgaaccgtttggtattctggtgcaggcatcagca
gagaatttcagtaaggtcggaacggctttcatggaaggcgtcttagaactagacgatgga
ctttacgtcgatcagattatctctgtcgaagtccagggtcatccattcaatttggtggat
cctttagtcgataaagacgtcggattctcgctccctggaaataacttggacgaaagcagt
gaatttccctctgatggctcagaagttaagtccggaagacagtcgaggaagaagcactcg
tcgcaatttacaaagcgggtagagaaacagaagaagggcacagacgacaaagggggagtc
aacggagctctctcggactctacgaaaccgccgaacgttttgattttcaccggggacaac
ccacaagctgctgaaatatttgaaaaggccactcaagccctagaaggtgtcctcggcaga
gacaaatacgtcgtctatcagttgacacctgatcaactagccggtcacccttggtcggaa
aatacggctctcttggtcaccgttggacaagctgggacggcgttcacgaaggaacagctg
gacattgtcaacgattacgttgtagtcggaggaaagcttttaaatgttgggatgaacttg
gcctttgaggtgggacagtatgcagctggtaaaaagtcacctttgaccccaacagatata
aattacaaagctaagaactcagcagacgaagtatctttcagggctccgtactcttcggat
cagattcaggtcacgtcagaggattcctcctctgtcctggtctccgttaaaggggagagc
ctcgtggtggaatgcgccgaggatcggggaaaggtcattcactcaaggctgcctttggtt
gcattggagcaggtaacagatgagaatgctaaatcatgcctgcaacagatattggcagat
gttctcagcagacttcagataacgtgtcaaccagaatggaaattaccagacctaacaccg
tgcttcctggtagcaaatactccggcaaccaatagtgcctttcacaactctgtcaaaccc
ctccttcagaagtccatcctgaaagcttcacccgtgtcacttttctttgcatccaatttg
gcggaagcggaagacaaagtcagtgcggacttgctgacagtcctatccgatatgtcacct
tcgtcttctgcgttcgatgtcgacgtctacatgaagaacttaaagagcaaagtcctcggt
aacgtgctaatgtacatcgaagtagttcccacgacgatgacattattcgaaagctttatg
ttcaaggtgccgaagactgttggagctgttgcggtagcctccagacagacgaaaggaaaa
ggacgtggaggcaacaaatggctttcacctctcggttgtgcgatgttcacagcgcacgtc
cagtttcaaagtggtacaaagctaggctcgaaacttcctttcctccagcacatgccagcg
ttagcagccgtggaggctatccgtaccagaccaggctatgagaacctggacttaggagtt
aaatggcccaatgatatctactttgggggtaaacagaaagtcggtggtgttatggtgaaa
tccagttgtatgggtcgtgatttccatgctctcgttgggattgggtttaatgttgctaac
agcaaacctaccctctgtgtcaatgacatcatcgaggaatacaatgagaaaaatcaaacc
gacctttcacctctcaaagtggaagaggtcatcgcatggacgctgacagtcctggagaag
atgattgacgacttccaacgtgagggacacctccagttctgtaaacattactatcagagg
tggcttcacaatgattcggtcgtccatctggaacgtgaggacggccctgaagttacagta
attggattagacagctcaggatttctggaggtgaaagacaaagacggcaagctgatcagt
ctccaacccgatgggaactcattcgatatgctgaagaatctaatccagatgaaaaagagg
tag
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