Apostichopus japonicus (Japanese sea cucumber): 139963339
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Entry
139963339 CDS
T10891
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04137
Mitophagy - animal
ajj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139963339
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139963339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139963339
04121 Ubiquitin system [BR:
ajj04121
]
139963339
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139963339
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
139963339
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139963339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
HH_EMRA
CCDC186_helical
CEP135_N
Fib_alpha
ATG16
DUF641
DUF3450
CLIP1
HAUS3_CC
HIP1_clath_bdg
UPF0242
YabA
Motif
Other DBs
NCBI-GeneID:
139963339
NCBI-ProteinID:
XP_071820086
LinkDB
All DBs
Position
22
Genome browser
AA seq
293 aa
AA seq
DB search
MASYAQDTSDSGAGMTGMPETEQDSNFAISSTLGDLQHLTLSSKDQHVQQELKHILEKYG
KAIVVQGEKSKYFIEMVERVIDISEVSARETKQLDEHVKRLAEELRNKEINIQQLQATIS
VQETELSRLQMDLSRLERTSYDGILMLEIKDYSRKKTEAQNGPTSFYTDAFYTDKYGYKM
CARIYLNGDGVGKGTHLSIFFAIKKGPYDSYLKWPFQRRVTFTLLNQEGKEDISDSFRPD
TTSSSFQKPRRDMNIASGCPMFASHSVLENPREGFLRSNTICIKVIVDPPPSR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctacgctcaagacacttcagacagtggagctggaatgacaggaatgccagag
acggaacaggactcaaactttgccatcagcagcacactgggtgatctgcagcatctgaca
ctctcgtccaaagaccagcacgtccaacaagagttgaagcacattctcgagaaatacggt
aaagccatcgtagtccaaggcgaaaagtcaaagtatttcatagaaatggtcgagagggtg
atagacatcagcgaggtatcggcaagggagacgaagcagctggacgagcacgtgaaacgg
ctggcagaggagctgcggaacaaggagatcaacatacaacagctccaagccaccatctca
gtgcaagaaacagagctctcccgacttcagatggatctctcacgcttggaacgaacttcc
tacgacggcatcttaatgttagagatcaaggattactccaggaagaagactgaagctcag
aatggccccacttcattctacaccgatgcattctacacggacaaatatggatacaagatg
tgcgcacgcatttatctgaacggcgacggggtaggcaagggcacccatttgtcaattttc
tttgcgatcaagaaaggtccctacgatagctatctgaaatggccgtttcagcgccgagtg
actttcacgttgctcaatcaggagggcaaggaggacatcagtgattcctttcgtccagac
acgaccagttcctccttccagaagcccagacgagatatgaatattgcttccggctgtccg
atgttcgcttctcattcagtgttagagaaccctcgagaagggttcttgagaagtaacacc
atatgcataaaggtcatagttgaccccccaccatctcgttga
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