Apostichopus japonicus (Japanese sea cucumber): 139968066
Help
Entry
139968066 CDS
T10891
Name
(RefSeq) small ribosomal subunit protein mS39-like
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ajj03029
]
139968066
Mitochondrial biogenesis [BR:
ajj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
139968066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
TPR_24
PPR_long
PPR_1
PPR
T4SS_TraI
TraF
Motif
Other DBs
NCBI-GeneID:
139968066
NCBI-ProteinID:
XP_071828505
LinkDB
All DBs
Position
5:22453361..22486474
Genome browser
AA seq
687 aa
AA seq
DB search
MATPSKFSCARNICKLCLKFPLSKNSSRFYVHATSGIQNTVQKTDELESSFNKLVIPKRK
KRDDLAVLRALSETVGKDSTASPYGYHDDPFLLPKTPMERKRYLLAAESGRKAAQLVIRT
KPDVFLAHQNDEPKIEAYYPPNKTYIFTDPSEDGIMERLDQLDFKSACDMHKELIDSGKE
VGLDVSNALLDALCYYNSRPPLDVIEFDKPPAKEEGSDIIEEEKQEEVAEAIEPPAPNEK
QIMKQWIQDTWKEGEENMAQVLFESLKEPDSHSYNAMIRGMVKHGAHGKAFNLFNKMQEK
GIQTSLHGYNALISAVTSIRTDYKDRWEVLVQLLKQMQAENIRPNVLTFNNLLNSLRLMG
AIGRNKALQTLSEMRVVNVAPSLGTYSLLLTVFYKDHLPPNDIIYDIVDTIEGEEFTYQD
PNDMNFFKNAMNICFNLKDVRLAYRIDALLNTGSNYKLCGDTSKQSLYYSRFLHLICLMD
SAEAMYEYYEKLVPSGFIPNGLVYMDMMRSIQTAGSFEKLPLIWKDMCIYGLRYRQEGVD
LLLQVMATAESTDIKVLKELAALADDIQKAFLESQNRRDQMKWNILGLTNLAMVYIRAQD
IGKAWATLNMHEKLKKTPGQAVLEDFITLCCDTKNLEKALECLEMAVRKSLAFAPALAEK
IRQDPELTVEQSKKITEILRTEDSNLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccctcaaaattttcgtgcgctcgcaatatctgcaaattgtgtctgaaattt
ccactttcgaagaattcatctaggttttatgttcatgcaacctcagggatccaaaacacc
gttcagaagaccgacgaactggagtcatcatttaataaacttgtcattccaaaaaggaag
aagagggatgacctggctgtgcttagagctttatctgaaactgttggaaaggattctaca
gcatcaccttatggttaccatgacgatcctttcctgctgcctaaaacgcccatggaaaga
aaaaggtatttgctggctgcagaatctggtagaaaggcagctcaacttgtaatcaggaca
aaaccagatgtgtttcttgcccatcagaacgatgaaccaaaaattgaggcatattatcca
cccaacaagacatacatcttcacagatccctcggaagatggcataatggaacgcctcgat
caactagattttaaatctgcttgtgatatgcacaaagagctcatagattcagggaaggaa
gttggtctagacgtctccaatgcactacttgatgctctctgttactacaacagtcgacct
cccttggatgtgattgaatttgataaaccgccagccaaagaggagggaagtgatattatt
gaagaggagaagcaggaagaggtggctgaggctatcgaacctccggccccaaacgagaag
cagataatgaaacaatggattcaagatacctggaaggaaggtgaagaaaacatggctcag
gttttgtttgagagtttaaaggagccagacagccatagttacaatgccatgatcagggga
atggtgaagcatggtgctcatggaaaagcatttaatctctttaataagatgcaagagaaa
ggaattcaaacatctttgcatggatacaacgctctcatatcagctgtgaccagtatacga
accgactacaaagataggtgggaggtgcttgtgcaactcttgaagcaaatgcaggcagaa
aatatccgtccaaatgtcctaactttcaacaaccttttgaatagccttagactgatggga
gccattggccgaaataaagctctacagacgttgagtgagatgagagttgtcaatgtcgct
ccttctctcggaacatacagtctccttctcacagttttctacaaagaccatttgcctccc
aacgatataatctatgacatcgtagataccatagagggagaggaatttacttaccaagat
ccaaatgacatgaactttttcaagaatgctatgaatatttgctttaatttgaaagatgtc
cgtcttgcttaccgcatagatgccctgctcaacacaggcagcaactacaaactttgtggt
gacaccagcaagcagagtttatactattcccggttcttacatttaatttgtctaatggac
agtgcagaagccatgtatgagtactatgagaagttagtgccctcgggtttcatacccaat
ggtttggtatacatggatatgatgagatctatacaaacagcgggaagttttgaaaagctt
cctcttatctggaaagatatgtgcatttatggactgaggtacagacaagaaggtgtggac
ctattactgcaagtaatggccacagctgagtccacagatatcaaggtattgaaagagctt
gcagctttagctgacgatatccagaaggccttcttggaatcacagaacagaagggatcaa
atgaaatggaatattcttgggttgaccaaccttgcgatggtttacatccgagctcaagat
attggcaaagcctgggcaacactgaatatgcacgagaagctaaaaaagactccggggcaa
gcagtcttggaagatttcatcaccctatgttgtgatacaaagaacttggagaaagccctg
gaatgtctagaaatggcagttcgaaagagtcttgcctttgcaccagctttagccgagaag
attcgccaggaccctgaacttacagtcgagcagagcaaaaagataacagagattctgagg
acggaagatagcaacctgaactaa
DBGET
integrated database retrieval system
