Apostichopus japonicus (Japanese sea cucumber): 139968535
Help
Entry
139968535 CDS
T10891
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139968535
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139968535
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139968535
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
139968535
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
139968535
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139968535
Prokaryotic type
Other AARSs
139968535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
DZR_2
Motif
Other DBs
NCBI-GeneID:
139968535
NCBI-ProteinID:
XP_071828725
LinkDB
All DBs
Position
1:14303319..14328434
Genome browser
AA seq
1017 aa
AA seq
DB search
MLFLSKQDVRGFMIPLRCLCTLTTGVHTPAELQAHSPLDLHRNRRNFRYQRSNPNILQKC
KYSSKKYSKSLKLPYTSFELWGAGKRETEIQRVCEFDKLYLWQQHDSRTKEFCLHDGPPY
ANGDPHVGHAVNKILKDIINRYKLLQGYKVHYIPGWDCHGLPIELKAISGKPEDFQSMSP
QEIRKKARKFAEGAIKKQRAAFRRWGVMADWQNCYYTFDKHFEASQIELFYKMFKQGFIY
RDWKPVNWSPSSRTALAEAELEYNPLHISPSIYVKFPLHLRSSSLQSHSDKYKSISCLIW
TTTPWTIPANQAICYMPSKRYALVECIETKDWMILAAERIEETAKMIGMELRIEEIFDGS
DLEGCQCSHPTQEGKHVPLLPANHVKMSLGTGLVHTAPAHGTEDFNVGLQYKLPMQCLVD
GQGYYTEEAGPALLGKNVLKDANETVIGMLQSQNALLHKADYEHSYPYDWRTKEPIIIRS
SQQWFVDTNRIKEKAEKCLEDVNMTPGSAITNMSNCLGNRSFWCISRQRVWGVPIPVFYH
KDTGQPLINRHTINHIVDLVKQQGTDCWWELSHQELLPKKILELSNINSEPDEYSAGSDI
LDIWFDSGSTWSHVLKGQQADMYLEGEDQYGAWFQTSLLTSVAVQNRAPYKSLLVHGFTL
DGNGRKMSKSLGNVVDPDVIINGGKDKKKEPAFGADVLRWKVADSDWTTRVLITPDYFAS
ANQNIIKIRNTVRYFLGNLHDFDPSKNSVPVEDVTLLDQYMLHLIYEYANEVTGAYERYD
FADVTKLVINFVSNKISTLYLDTVKDRLYCEAADSRLRRSCQTVLYHMFQVISRSLAPIL
PHLAEEAHLHFTKSDKDAISVFKTGWCTCHPSWHHSDLAVTFEVLLAVRQAFHGAVTSSS
SRDHDVVIQTKSEALLSLLERVQSEDNSCISQLSEIMMASFVSITNDYAKLDSEGSVQVE
AKVLVANADNNKVVPSDYTLVIQEASHHRCERCRKYTAPIPGQPCNRCIKVLSEGWE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttgtcaaagcaggacgttcgtgggttcatgatacctctgcgctgtttgtgc
acattaacaacaggagtccacacacctgccgaattacaggcgcattcaccgttagaccta
cacaggaataggcgtaactttagatatcaaagaagcaatccaaatatcctacagaagtgc
aagtattcgagcaaaaagtacagcaaatccctgaagttaccatacacatcgtttgagcta
tggggagcaggaaaacgagagacagagatccaaagggtgtgtgaatttgataagctctac
ctgtggcagcagcatgactcacgaacaaaggaattttgtcttcatgatggaccaccgtat
gccaatggagatcctcatgtaggacatgctgtgaacaagatattaaaagatattataaac
cgttacaagctactacagggatataaggtgcattacattcctggctgggactgccatggg
ttaccaatagagctaaaggccatctcaggaaagccagaagacttccagtcgatgtcacct
caagaaatacgaaagaaagcaaggaaatttgcagagggtgccattaaaaagcagagggca
gcatttagaagatggggtgtcatggcagattggcaaaactgttactatacttttgacaaa
cattttgaggcgtcacagatagaactattctacaagatgtttaaacagggttttatttat
cgggattggaagccagtaaattggtcgccttcctctaggactgccctagctgaggctgag
ctagagtataacccacttcacatatcaccgtctatttatgtcaaattccctcttcatctg
aggtcttcttccttgcaatctcactcagacaaatacaagagcatatcatgccttatatgg
acaaccacaccatggactattccagccaatcaggcgatctgttatatgcctagtaagagg
tatgctctagtagaatgtatagagaccaaggattggatgatactagcagctgagagaata
gaagaaacagcgaaaatgatcggcatggaactcagaattgaggaaatatttgatgggagt
gatttagaggggtgtcaatgtagtcacccgacccaggagggtaaacatgtgcctctcctt
ccggccaaccatgtgaagatgagtctcggtacgggattggtccacactgctccggcccac
ggaacagaagatttcaatgtaggcttacagtataaactaccgatgcaatgtctagtggat
ggacagggttattacacagaagaggctggtccagcattattgggaaaaaatgttctgaaa
gatgccaacgaaactgttataggaatgttgcagtcccagaatgccttgctgcacaaggca
gattacgaacacagttatccctacgactggaggaccaaggagcccatcataatacgaagc
agccagcagtggtttgtggatactaatagaatcaaggaaaaggccgagaaatgtttagag
gatgtcaatatgactcctggaagtgcaataaccaacatgagtaactgtctgggcaataga
tcattctggtgtatctctcgtcaaagggtatggggagtaccaataccggtgttctaccac
aaagacactggacagccactcattaacaggcacacaattaaccacatcgtcgacttggta
aagcaacaaggaacagattgctggtgggaactttcacatcaggaactgcttccgaaaaag
attctagaacttagtaacatcaattcagagcctgatgaatattcagcaggttcagatatt
ctagatatctggtttgacagtggatcgacttggtcgcatgttttgaaaggtcaacaggct
gacatgtatttggaaggggaggaccagtatggtgcgtggttccagaccagtttactgacc
agtgtagcagtccaaaacagagcaccttacaagtccttattagttcatgggttcacactg
gatggcaatggtcgcaagatgtccaagtcactcggtaatgtggttgaccctgacgtgata
atcaatgggggcaaggacaagaagaaagaaccagcgtttggagccgacgttctccgatgg
aaagtggctgattccgattggacgacgagagtcctcatcactcctgattattttgcttcg
gccaatcagaacatcatcaaaataaggaacaccgtccgttattttctggggaatttacac
gactttgatccgagtaagaattccgtccccgtggaggatgtcacccttctcgatcaatac
atgcttcatcttatctatgaatatgcaaatgaggtcactggagcttacgagagatacgac
tttgccgacgtgacgaaactcgtcattaactttgttagcaataaaatttcaactctttac
ctcgatactgtgaaggacaggttgtactgcgaggcagctgattccagattacgcaggtct
tgccagactgtgctctatcatatgttccaggtcatatccaggtcactcgccccaatactc
ccccaccttgccgaggaagctcatctacattttactaaatctgacaaagatgccatcagt
gtattcaaaacaggatggtgcacctgtcatccctcatggcaccactctgacctcgccgtg
acctttgaggttctcttggccgtgagacaagcctttcacggcgcagtgacatcttctagc
tctcgggatcatgacgtggtcatccagaccaagagtgaagctttgctgtccctcctcgag
agagtccagtcggaggacaactcatgcatctcacagctgtctgaaattatgatggcctcc
tttgtgtccattacgaatgattatgcaaaacttgattcggagggaagcgttcaggtagaa
gctaaggtccttgtagcaaatgcagataataacaaagtagtgccttctgactatacgcta
gttatccaggaggcttcacaccacagatgcgaacggtgtcgtaagtataccgcacccata
ccaggacaaccgtgcaatcgttgtatcaaagtactctctgaaggatgggagtag
DBGET
integrated database retrieval system
