Apostichopus japonicus (Japanese sea cucumber): 139969222
Help
Entry
139969222 CDS
T10891
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00900
Terpenoid backbone biosynthesis
ajj01100
Metabolic pathways
Module
ajj_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
139969222
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ajj01006
]
139969222
Enzymes [BR:
ajj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
139969222
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
139969222
2.5.1.29 geranylgeranyl diphosphate synthase
139969222
Prenyltransferases [BR:
ajj01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
139969222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
139969222
NCBI-ProteinID:
XP_071830224
LinkDB
All DBs
Position
6:18416708..18439338
Genome browser
AA seq
322 aa
AA seq
DB search
MAANDGGNGSTAKEDMDKFQERILLEPYQYILQNPGKEVRVKLTQAFNYWMKIPNDKLEI
VSEVTQMLHNASLLIDDIEDSSKLRRGNPVAHSIYGIPQTINTANYVYFLALQKIMALEI
PEATKIYMEQLLILHQGQGMDIWWRDNFNCPTEEEYKEMVLKKTGGLFGLAVRLMQLFST
NKSNFKPLIDALGLFFQIRDDYANLQSSDYTDSKSFCEDLTEGKYSFPIIHGILSQPEST
QVKNILRQRTTDFEVKKYCVEYLEKIGSFEYTRKIIAEYTELAKKQIQELGGNPYLESIV
QELGSIICQSTQLPSKRKKENV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaatgatggtggcaatggtagcacagcaaaagaagatatggacaagtttcag
gaaaggatattactggagccttatcagtacatcctacagaatcctggcaaagaggtcagg
gttaaacttactcaagcatttaattattggatgaaaataccaaatgacaaactagagatc
gtcagtgaagttactcaaatgctgcacaatgccagcttgctcattgatgatatagaagac
agctcaaaattacgccgagggaaccctgttgctcacagtatatatgggatccctcaaacc
atcaacactgccaattatgtctacttccttgccttacaaaaaataatggctttagaaatt
ccagaggcaacaaaaatttacatggaacaactcttaatcttacaccaaggccaaggtatg
gacatttggtggagagacaacttcaactgtcctacagaagaagagtataaagaaatggtg
ctgaaaaaaactggtggcctgtttggtctagctgtccgacttatgcaattgttcagtact
aataaaagtaatttcaaaccactcatcgatgctttaggacttttctttcaaattagagac
gattatgccaacttacaatcaagtgattacacggacagtaaaagcttctgtgaagatcta
acggaagggaaatattcctttccgatcatccatgggatcttgagccaaccagagagcact
caggtcaaaaatattctcaggcaaaggaccacagattttgaggtcaagaaatactgtgtt
gagtacctagaaaagattgggtcctttgagtatacaaggaagattatagctgaatacact
gagttggcgaagaaacaaatccaggaacttgggggtaatccttaccttgagagtattgtt
caagaacttggctcaattatatgccaaagcacccaactcccatcgaaaaggaagaaagaa
aatgtataa
DBGET
integrated database retrieval system