Apostichopus japonicus (Japanese sea cucumber): 139974816
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Entry
139974816 CDS
T10891
Name
(RefSeq) retinoblastoma-associated protein-like isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ajj01009
]
139974816
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139974816
Protein phosphatases and associated proteins [BR:
ajj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139974816
Transcription factors [BR:
ajj03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
139974816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
F1F0-ATPsyn_F
Motif
Other DBs
NCBI-GeneID:
139974816
NCBI-ProteinID:
XP_071838359
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All DBs
Position
10:complement(14537382..14564051)
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AA seq
830 aa
AA seq
DB search
MAWVQLVEECISRLNLPKLICQRSRMVLQEWIQLELTANGEVSWKEKDNALLTVCAIYTA
LIEYRTEMESPSEQGPRFTLLQILRAGNVNLKKFLQFMNDIGEKYQHSSTMKNCLLGTQR
KYVITIGIYKTFDRLMEHIFESSGQKDPSESTYRRRVCWCLFLVAKVTVLPENTELIPAL
HLMLCCLEYIVKQSPLFMLKEPFRTANSEERLRQDSLSVLTAINTAFTSDSDMKELESAQ
TNHFHPFIQGLPVEVLNQTADGLPRLKYFERKYRAEYELTADIDEMAFLDDDPLLKPMEE
GSPSPDSTINTETGPSIPQTPVRNSVRAVQSLKTLLASANDRPSDSLRLLLSEYGANLVN
EVTNRIEELQNTFLEHYALNVRASQTIAKTRYRLGVRLYYRELDQIIKRERERKVQRASI
VSLLSEDIFHRCILACSLEVVKVYYEYNASPTQESSIGRGGLDFPWILTIFNVHPYDFCR
VIETFIREEAQLSEQAIKHLTSVEEFILESEAWKEGSPLLEALRAKIANTQQVNSPGCSV
VGSSGGGQHKDVFLTKFLMKAQQLGFKRLERLSQPLKLSGDITHRIWTCVDHCIRQRPDL
LEGRHLDQIIMCCIYAICRVGSAQNQRRLKEIANLYEKMPHADSSTYKQVRLGAGETGHI
IKFYNDVFVPAMKTFILSQHSENHPNSPVPHRSPSQQKSYKVHPNFTVSPLRHSPFKSPD
SQRQPGSSAAVTPRTALLLNTDEEFISNKLQNFNKTYGTSSKRKNDSQEPVKSRKKLNMG
DGGSTTEGSREQSSNTDVENQSEARSILRTKLPRSPSSQIVQCQEFQHSI
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggttcaattggtggaggagtgcatatccaggttaaacctgccgaaacttatc
tgtcaaaggtctcggatggttctgcaagaatggattcaactggaactgacagcgaacggc
gaggtatcttggaaggagaaggacaatgccttgctgaccgtgtgtgcaatatacaccgct
ctaattgagtacagaaccgaaatggaatcgccgtctgagcagggaccaaggtttacattg
ctgcagatcttacgtgcaggcaatgtaaatttaaaaaagttcttacagtttatgaatgat
attggagaaaagtatcaacacagttcgacgatgaagaattgtttactaggaacacaaagg
aaatatgtaataaccatcggcatctacaaaacatttgacaggttgatggagcacattttt
gagtcctcagggcagaaggacccatctgagagtacctacagacggagggtttgctggtgt
ctgtttctggttgctaaagtaaccgtcctaccagagaacacagagttgataccagctcta
catttaatgctgtgctgtctggaatatattgtcaagcaatccccacttttcatgctcaaa
gagcccttcagaacggccaattcagaagagagactacgccaagactctctgtccgttctc
accgcaatcaacaccgccttcacgtcagactctgacatgaaggaacttgaatcagctcag
acgaaccacttccatccattcattcaaggcttacctgtcgaagttctaaaccaaaccgcc
gatggcttgccaaggttgaaatattttgagagaaagtacagggccgagtacgagcttacg
gcagatattgatgaaatggctttcttagatgacgaccctttactgaagccaatggaagag
ggatccccttccccggattcaacgatcaatactgagacgggaccctctatccctcagact
cctgtcaggaattctgtcagagcggtgcagtcgttgaagactttgttagccagtgctaac
gatcgaccttctgatagtcttcgtttacttctcagcgaatatggtgctaatttagttaat
gaagtgaccaaccgaatcgaagagctacaaaacaccttcctagaacattatgctctgaac
gtacgtgcatcgcagaccatcgcaaagacgagataccggctcggcgttcgactttattac
agagaacttgatcaaatcattaaaagggagagagaaaggaaagtccaacgggcctctatc
gtcagtctactctcagaagatattttccatagatgcattctcgcttgtagtctggaagtt
gttaaggtttactatgaatacaatgcttctccaacacaggaatcgtctatcggtagaggt
ggactagattttccttggattctcaccatatttaatgttcatccctacgacttttgccgt
gtgattgagacttttataagggaggaagcacagctatcagagcaagcaataaagcatttg
acgagcgtggaggagttcatcctggaaagtgaagcatggaaggaaggctctccactttta
gaagcactgagggcaaagattgctaacacccaacaagttaacagtcctggatgttctgtt
gttggaagttctggtggtgggcaacataaagatgtcttcctcactaaattcctcatgaag
gctcaacagctcggcttcaaaagactggagagactgagtcaaccattgaagctctcagga
gatattacacatcgtatatggacttgcgtggatcattgcataaggcagagaccggatcta
ctcgaagggagacatttagatcagatcattatgtgctgtatctatgccatctgtagagtt
ggtagcgcgcaaaatcaaaggagacttaaggaaatagcaaatttgtacgagaaaatgcca
catgctgatagctcgacgtataagcaggtcagactcggagcgggtgaaaccggacatatc
atcaagttttacaatgacgtctttgtacctgctatgaagactttcatccttagccagcat
agtgagaatcatcccaattctcctgtaccgcatcgttcaccaagccaacagaagtcctac
aaagttcatcctaattttactgtatcaccgctgagacactccccttttaagagcccagat
tcgcagaggcagcccgggtcttcagctgcagtaacaccccgtaccgcgctgctacttaac
actgatgaggagtttatttcgaataaacttcaaaactttaataaaacctatggcacttca
tcgaagaggaagaatgatagtcaagaaccagtaaagtcccggaagaaattgaacatgggt
gacggtggatccaccacagagggcagcagagaacaatcaagtaatactgacgtagaaaat
cagtcagaagcgaggagcatccttcgaactaaactcccaaggtcaccttccagccaaatt
gtgcaatgtcaagagtttcaacacagcatatag
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