Apostichopus japonicus (Japanese sea cucumber): 139976955
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Entry
139976955 CDS
T10891
Name
(RefSeq) thyroid hormone receptor beta-like
KO
K08540
pregnane X receptor
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139976955
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ajj03310
]
139976955
Transcription factors [BR:
ajj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139976955
Nuclear receptors [BR:
ajj03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
139976955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SOG2
PAP1
Motif
Other DBs
NCBI-GeneID:
139976955
NCBI-ProteinID:
XP_071841975
LinkDB
All DBs
Position
12:complement(23695112..23737228)
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AA seq
442 aa
AA seq
DB search
MAKSHQKNKMAADTSCLDDTPICVVCGDKANGMHYRAMTCEGCKTFFRRNARNHLNLKCE
MGSQKRCDMDLYTRRHCAACRMKKCFDMGMQIERLWDKDRLKTRKPITKKAAAEAALFKS
ENKAPTVTPNKQKRSKPDLADMVKNAYLLAATQPLSAQTEVAGTNPSSSQGESQPSTSSS
SSTSSSSSSSSSSLPSSSTSAGPSTSLPQTVPQSSEQMGYMHSKVGQHIAENLKSIELPN
GFGEISQSLVIRALDVLLGLLKHLINFAKNLPAFLSLATEDQATLIKASFLEYVIISSAS
LYNPETETFESELWPEENWDFEKVSSVGFKRIYSSVIDVAVKVSKLKPSRAELTLLYAIS
IFTPERKDLCNSEDVEKMQQDLLQALRHSIEKRTDNSVGHFAKMIMLLTDVKNITDVFLE
DVLSMQLQGAVLSPIMMEMFLE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtctcatcagaagaataagatggctgcggacacttcgtgccttgatgatacg
cctatatgtgtggtctgtggggataaggccaacggcatgcactacagagccatgacgtgt
gagggatgcaagacgttcttcaggagaaacgctcgcaatcacctgaatcttaagtgtgag
atgggcagtcagaaacgttgcgatatggacctctacaccagaagacactgcgctgcctgt
aggatgaagaagtgctttgacatgggcatgcagatagagagactttgggataaagacaga
ttaaaaacgagaaagccaatcacaaagaaggcagccgctgaggctgctctcttcaaatct
gagaataaagctccgacggtgactcccaacaagcagaaaagaagtaaacctgacctagca
gacatggtgaagaatgcatacttattagcagctactcaacccttgtcagctcaaacagaa
gtagctggcacaaacccatcttcgtctcagggagaatctcaaccgtcaacatcatcgtcg
tcgtcaacatcatcgtcgtcgtcgtcatcatcatcatcattaccatcatcatcaacatca
gctgggccttctacatcattacctcagactgtaccgcaatcgtcagaacagatgggttac
atgcattcaaaagttggacagcacatagcagagaacctgaaatccattgaattgccaaat
ggattcggagaaatatcgcagagtctagtcatcagagccctggacgttttgttggggctt
ttgaaacacttgataaactttgccaagaacctgccagcatttctgtctctggccacggaa
gaccaagctactctgatcaaagcttcattcttagagtacgtcatcatcagctcggctagc
ctctacaatcctgaaacagaaacatttgaaagtgaactctggccagaggaaaactgggac
tttgaaaaagttagttcggtcggtttcaagagaatttacagctcggtgatcgacgttgcc
gttaaagtatcaaaactgaagccgagcagagctgaactgacactgctctatgctatatct
atcttcacaccagagcgtaaagatctgtgcaattcagaggatgtagagaaaatgcaacaa
gatctgctccaagccctcagacattccatcgagaagagaacagataacagtgtcggacac
tttgccaagatgattatgttacttacggatgttaagaacattactgatgtcttcttggaa
gatgtgctcagtatgcagctacaaggtgcagtcctcagtcccatcatgatggagatgttc
ttagagtaa
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