Apostichopus japonicus (Japanese sea cucumber): 139978263
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Entry
139978263 CDS
T10891
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00514
Other types of O-glycan biosynthesis
ajj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139978263
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139978263
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ajj01003
]
139978263
Enzymes [BR:
ajj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
139978263
Glycosyltransferases [BR:
ajj01003
]
Glycan extension
O-Glycan
139978263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
DUF4057
Motif
Other DBs
NCBI-GeneID:
139978263
NCBI-ProteinID:
XP_071844438
LinkDB
All DBs
Position
1:2222103..2260302
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AA seq
462 aa
AA seq
DB search
MRRKVSRLFYWAVTMVVLTGVFVVFKSSLGLPDDSQSDVPNGHFLRLRDKINHGQKKIQE
KSIPFIVPVENPGVVRKLEGNSNHRTRNVVQEEVEVKPVIEPQDILYKQPYLPKTNMRKL
DEVRNFSKVEEEEEGRNLSHPKQQKKTTKNFNTSQRKGSQSNNFDDDAIVRKIVNRTLQK
KPSELTLNDIFIGVKTTRRYHKSRLDILVKTWFQNAKQQTFFFTDGYDPEWQNKTGGQMI
ITDCPTDHHRQSLCCKFSKMYQMYLESGKKWFCHLDDDNYLNVDNLLSVLSEYPPEQDHY
LGRSSLNHAIETIDREDGMKTVRFWFATGGAGFCISRALALNMSPYAGGGLFTSMCNRIR
LPDDVTVGFISEHLVKTKLTSNKLFNSHLQFLKLFKGETLKKQITLSYGLSEQRSNVVTV
PEAIFTIQEDPSRFLSLHCYLYPDADICHRQHAVKFVNNHSR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaaaggtgagcaggttgttttattgggccgttactatggttgtcctaacaggt
gtgttcgtagtgtttaaaagcagcttaggcttacctgatgactcccagtccgacgtaccc
aatggtcattttcttcgtctgagggataaaatcaaccatggccaaaagaaaatccaagaa
aaatccattccatttatcgtgccagttgagaatccgggtgtcgttcgtaaattggaagga
aatagtaaccacagaacaagaaatgtagtccaagaagaagttgaagttaagccagtaatt
gaaccacaggacattctttataaacagccatacttgcccaagactaacatgagaaaacta
gatgaagtacgaaacttttcaaaagttgaagaagaagaagaaggcagaaatctaagccat
cccaaacagcaaaagaaaaccaccaagaattttaacacaagtcaaagaaaaggttcccaa
agcaacaattttgacgatgatgcaatagttaggaaaatagtcaatagaaccttgcagaag
aaaccctccgagttaacacttaatgacatttttataggagtgaaaacgacgagacgttat
cacaagagccgcttagatatcctggtgaaaacttggttccaaaatgctaagcaacagact
ttctttttcaccgatggatatgatcctgaatggcaaaacaaaacaggtggtcagatgata
ataacagattgtccaacagatcatcacagacagtccctctgctgcaagttctccaaaatg
taccagatgtacttggagtctgggaagaagtggttttgccatcttgatgatgataactac
ctcaatgttgacaatctcctatctgtcctgagcgagtacccaccagaacaggaccactac
ctcggtagaagcagcttaaatcatgcaatagaaaccatcgatagagaggatggaatgaaa
accgtccgattttggtttgccactggtggagctggattttgcattagtagagctttggct
ttaaatatgagtccatatgctgggggaggtttatttacatctatgtgcaataggatacga
ctccctgatgatgtgactgtcggcttcattagtgagcatctggtgaagacaaagttgacc
agcaataaattgttcaactcccatcttcagtttttgaaactgttcaaaggagagacttta
aaaaaacagataactttaagctatggactttcagaacaacgatctaatgtggttacagta
cccgaggcaatatttaccatccaggaggatccgagcaggtttctgtccttacactgttac
ctgtacccagatgctgatatttgccaccgacagcatgctgtgaagttcgtgaacaatcat
tccagataa
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