Apostichopus japonicus (Japanese sea cucumber): 139979651
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Entry
139979651 CDS
T10891
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139979651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139979651
04121 Ubiquitin system [BR:
ajj04121
]
139979651
Membrane trafficking [BR:
ajj04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
139979651
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139979651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
HHH_3
F-box-like
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_EIPR1
F-box
Beta-prop_DCAF4
Beta-prop_RIG_2nd
HHH
PQQ_2
Ge1_WD40
Beta-prop_VPS8
Beta-prop_LRRK2
WD40_RFWD3
Beta-prop_NWD2_C
T2SSK
HHH_5
KNTC1_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
139979651
NCBI-ProteinID:
XP_071846761
LinkDB
All DBs
Position
14:complement(16583991..16601916)
Genome browser
AA seq
686 aa
AA seq
DB search
MARRVDINSANTDELETLLGIGKARAEAIIKHREASHGFKNVNELLSVPGVGSNILELNG
NRIVCDTVRHLPSQSSHYLRNSGSSSGRSRVQQTTGDVLPRPVTRSREHSRRNSDHHDGQ
AQPSSSSSSSSTSRLSSISELENEDSRQVKRNATSSEERKASPTKKSCRFFTDDVGKAMP
PPASPVQTTSFKKADALPKRRLSTRLQPPANLVEWVKTFQHWSEAEKNLAIDELIEKCDP
SQVRHIMSVIEPQFQRDFISLLPKEVALLVLSFLEPRDILKAAQTCQTWRILCEDNLLWR
EKCLEAGIDEPTSKLLRRRSHGGVSRSPWKSLFLRTHQIEYNWRHGEMKPPKVLKGHDDH
VITCLQFCGQRIVSGSDDNTLKVWSALTGKCLRTLTGHTGGVWSSQMKNNIIVSGSTDRT
LRVWNAESGQCIHTLFGHTSTVRCMHLHENKVVSGSRDASLRLWDIDTGACLHVLVGHVA
AVRCVQYDGRRVVSGAYDFMVKVWNPETEECLYTLQGHTNRVYSLQYDGVHIVSGSLDTS
IRVWEADTGVHRHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDITSGRCLQTLQGTNK
HQSAVTSLQFDKKFVITSSDDGTVKLWDLKTGDFIRNLVVLESGGSGGVVWRVQASQTKL
VCAVGSRNGTEETKLLVLDFDAELSR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcagggttgatataaactctgctaatacagacgaactagaaactttgctaggc
attggtaaagcaagagctgaagccatcatcaagcacagagaggctagccacggtttcaaa
aacgtgaatgagttattatccgttccaggagttggaagcaacatccttgaattaaatggt
aacagaatcgtttgcgacaccgttaggcacctgccatcacagagcagtcattatctacgc
aactcgggcagctcttccggtaggtcacgagtacaacagactacgggagatgtcctgcct
agaccggtaacgagaagcagggaacattcaaggagaaactcagaccaccatgacgggcag
gcacaaccttcctcctcctcctcctcctcctccaccagcaggcttagctccatctcagaa
ttggaaaatgaagattccagacaggtgaaaaggaacgcaacttccagtgaggaaaggaag
gctagtccaaccaagaagtcgtgtcgtttcttcaccgatgatgtcggaaaggccatgcct
cctcctgcgagtcctgtccagacgacgagctttaagaaagctgatgcactgccaaagaga
agattgtcgacaaggttgcagccacctgctaaccttgtagagtgggtcaaaactttccag
cattggtctgaggctgagaaaaatttggctattgatgaattaatcgagaagtgtgatccg
tcccaagtcaggcatatcatgtctgtcatagaacctcaattccaacgagacttcatctcc
ttactgccaaaggaggtggcattgctcgtcttatccttcctggagccgcgggatattctc
aaggcggctcagacctgccagacctggagaatactctgcgaagataacctcctctggaga
gagaaatgtctggaggccggcatcgatgaacccaccagtaagctgctccgacggaggagt
cacggtggcgtgtcccgtagcccctggaagagtctgttcctcagaacgcatcagatcgag
tataactggaggcacggagaaatgaaaccaccaaaggttttgaaaggccatgatgatcat
gtgatcacatgcctccaattctgcggccagcggattgtcagcggttctgacgataatacc
ttgaaagtttggtcggctttgaccggcaagtgcttgcggaccctgacgggccacactgga
ggggtttggtcttcccagatgaagaacaacatcatcgtcagtggctcaacggatcgtact
ctgagagtttggaatgctgaatctggccaatgtattcatactctgtttggtcacacctct
actgtacgatgcatgcaccttcacgagaataaagttgttagtggttctagagatgcatct
ttaaggctctgggacattgataccggggcatgtctccatgtgttagtgggccacgtggca
gcggtaaggtgcgtccagtacgacggccggagggtggtcagtggcgcctacgacttcatg
gtcaaagtctggaatccagagacggaggagtgtctgtacacacttcagggtcacactaac
agagtgtattcattacagtacgacggtgtccacattgtgagcggttcgttagacacatct
atacgggtatgggaggcggatactggggttcatcggcacaccttgaccggacaccagtcc
ctcaccagtggcatggaacttaaagacaacattctggtttcagggaacgccgattccact
gtcaaaatatgggatataacctcggggagatgtctgcaaaccttgcaaggaaccaacaag
catcagagtgccgtgacctctttgcaatttgacaaaaagtttgtgataactagctctgac
gacggaaccgttaaactgtgggacttgaagactggggacttcattcgaaaccttgttgtt
ttggaaagtggtggcagcggtggggtggtctggagagtacaggccagccaaaccaaactg
gtgtgtgcagtgggaagtcggaatggtaccgaggaaacaaaactcttagttctcgacttt
gatgctgaattatcaaggtag
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integrated database retrieval system
