KEGG   Apostichopus japonicus (Japanese sea cucumber): 139981185
Entry
139981185         CDS       T10891                                 
Name
(RefSeq) lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    139981185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ajj03000]
    139981185
   04121 Ubiquitin system [BR:ajj04121]
    139981185
   03036 Chromosome and associated proteins [BR:ajj03036]
    139981185
Enzymes [BR:ajj01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     139981185
Transcription factors [BR:ajj03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    139981185
Ubiquitin system [BR:ajj04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     139981185
Chromosome and associated proteins [BR:ajj03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    139981185
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     139981185
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like Cupin_8 LRR_6 JmjC JHD PHD F-box LRR_At1g61320_AtMIF1 JmjC_2 LRR_8 Cupin_1
Other DBs
NCBI-GeneID: 139981185
NCBI-ProteinID: XP_071849489
LinkDB
Position
15:complement(10204791..10233858)
AA seq 1179 aa
MTSQNETRRSMRSKARRHYDEGESQDDEIDGKRTYNIEDKLRDEKFNLDLIKEMKGEDFT
YKFIQEHGFQSPVVFRSTEGLGLRMPTKEFNVNDVKLYVGSRRMLDVMDVNTQKGVEMNM
AQFAKYYESGERDKLYNVISLEFSHTRLDDLVQSPAVVKKLDWADLSWPQHLKWTQRDST
NILAEMKYPKVQKYCLMSVAGCYTDFHVDFGGTSVWYHILHGKKVFWLIPPSEHNLQIYE
NWVLSSKQGDIFLGDKVSDCGKVYLESGDSFLIPSGWIHAVYTPADSLVFGGNFVHTFSV
TKQLRVAQIEDKTYVPAKFRYPFFTEIHWYTLERYVNILTGKSYLKEIEEPPATSQEDKA
EGEEADADENNANNGQVKEEEEEEDEDEEEESEGGTPDKKNDSGKEGRPVRQSRSRTRGS
NEQTEANKMEDYDSGEETDIETQEEEEEEGVSTKQETSDSEDSEIQFKTASGSLESSDKS
RDGEKMQNGDHETGDADGHKQEPHTEDNCHSPNGQVTPNEDGDVKPKPAAVETKYIHLCQ
QEMSEMSNLIDFLESLTEDRRLVPDLITDPDELIREGRRILTLHAADDQSLAIKGEPVLK
WPETMIKKAFKVKTVHHNRPPVRGNSTGTRKRRTRCRKCENCQQSDCGECHFCKDMKKFG
GPGRMKQSCISRQCLSPILPNTACCSICLLEERGSTDEVTLMECHQCNDIVHPVCLKDKF
EGEGVINDELLNSWECPRCVAGVSGKDRESGESSGSWKKRKETNQEGNESKPKILKKGKF
QQARQLKLKKSGRLTLPGVNTSKGKGSVTRLLLSQNKGKAGTGLYKYGRSKGSNAGQQMA
KHKVMQAKYHSIRGRAAWRKCKVGSRQMSTDDLNQSMETDEPVCKPLYVVRPVCLTPPPE
QFETVDGDSHILTRQLWMEIFSFMTPYQINLCMEVCKVWNEWCIDPQLWKTLSLARLSPL
KPEALRGIVRRQPLSLNLTGTNISHKQLAWLLPRLPNLEELYLGRSSWSAVTALASSNCP
LLQVLDLQWVSGVEDGILELLCSHLDEHRPGLVDDRSKLRDLKKLHLTGSDITDKGLSCL
IPCMSSLSVLDISYCGGLTDAGLREMVNETSPIAKSLIELNVSGCRKLTDEFLPDLRHCP
KLKKVVAHSCPLFTKDEWEAFSREFGVEICFTKPRGRPT
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgacctcgcaaaatgaaacaagaagatccatgaggtctaaggcaagacgtcattatgac
gaaggagagtcacaggatgatgaaattgatgggaagaggacatacaacatcgaagacaag
ctaagagatgaaaaattcaatctggatttgatcaaggaaatgaaaggagaagactttaca
tataaattcattcaggaacatggatttcaatcgccagtggtgtttaggagtacagaaggt
cttggcctgaggatgcccactaaagaattcaacgttaatgatgtgaaactctacgtcggg
agtcgtagaatgttggacgtaatggatgttaacacgcagaagggtgtggagatgaacatg
gcacagtttgccaaatattacgagagcggagaacgagacaaactatataacgtcatcagc
ttggagttcagtcacacacgattggatgatttggtgcagtcacctgccgtggttaagaaa
cttgactgggctgacctttcttggcctcagcatttgaaatggacacaaagagacagcact
aacatcttggctgaaatgaagtacccaaaagtacaaaaatactgtttgatgagtgttgca
ggctgctacactgacttccatgtggactttggaggcacatctgtctggtatcacattctt
catggtaaaaaggtattttggctcatcccaccatcggaacacaatctccagatttatgag
aattgggttctttccagtaagcaaggagacatcttcctcggtgataaggtgtctgactgt
ggcaaagtatatcttgaatcaggagactcgttcctcatccctagtgggtggattcatgct
gtctacacacctgcagactcactggtatttggtggaaactttgtccatacctttagcgtg
acaaagcagctacgcgtggctcaaatcgaagacaaaacatatgttcccgcaaagttcagg
tatcctttcttcacggagatacattggtacactctggagagatacgttaacatactgaca
gggaagagttacctgaaagaaatcgaagagccgcctgccaccagccaagaagacaaagca
gagggagaggaagcagacgcagatgaaaacaatgcaaataacggtcaggtaaaagaagaa
gaggaagaagaagatgaagatgaagaagaagaatcggaaggtggtacaccagacaagaag
aacgacagtggcaaggaaggacgaccggtgaggcagagcagatcgaggaccaggggatcg
aacgagcaaacggaggcaaacaagatggaggactacgacagcggagaggagacggatatc
gaaacgcaggaggaggaggaggaggagggcgtctccactaagcaagagacgtccgactct
gaggactcggagatacaatttaagaccgccagtggtagtctagagtcgagtgacaagtca
cgtgacggtgagaagatgcagaacggggaccacgagaccggagacgcggacggacacaag
caggaaccgcacactgaggacaactgccactctccaaacggtcaagtcactcccaacgaa
gacggggatgtaaaacccaaacccgctgccgtggaaaccaagtacatccatctttgccag
caggagatgtcagagatgagtaatttgatagatttcttggagagtctgacagaggatagg
agacttgtgcccgatttgataactgaccccgatgaattaatcagagaaggcaggagaatt
ctcacactccatgctgcagatgatcagagccttgccattaaaggagaacctgttctgaaa
tggccagagacaatgataaagaaagccttcaaagtgaagacagtccaccacaatcggccg
ccagtcagaggcaactcaactggtacacgtaaacggagaacgaggtgccgtaaatgcgaa
aactgtcagcagtcggactgtggggagtgtcatttctgcaaagatatgaagaaatttggc
ggaccagggaggatgaaacaatcttgcatcagtaggcagtgtctcagcccaatcttgcct
aacaccgcttgctgctcaatatgcttgctagaggagagaggttcaactgatgaggtcacc
ctgatggaatgtcaccagtgcaatgatattgtgcatccagtatgtctaaaggataagttt
gagggagaaggagtcataaacgatgaactgttgaatagctgggagtgtccgagatgtgtc
gctggagtctcaggaaaagatcgggaatctggtgagtcctctggtagttggaaaaagagg
aaggaaaccaatcaagagggaaatgagagcaagcctaagattctgaaaaagggaaaattc
cagcaagcaagacagctgaagctgaaaaaatctggacgtctgactcttcctggagtgaac
actagcaagggaaaggggtcagtgacgaggcttctgttatcacaaaataaggggaaagct
gggaccggcctctacaaatacggcagaagtaaaggaagcaacgcaggtcagcagatggca
aagcataaagtcatgcaggccaagtatcacagcatccgcggtcgtgctgcgtggcgtaaa
tgcaaggtcggttctcgtcagatgtcgactgatgacctaaaccaatctatggaaacggat
gaaccagtctgcaaacccctctatgtggttagacctgtttgcctcactcctccccctgaa
caatttgaaactgtggatggggatagccacatactgacccgtcagttgtggatggagata
ttcagcttcatgaccccatatcaaattaacctctgcatggaagtgtgtaaggtttggaat
gagtggtgcatcgatccacagttgtggaaaactctaagtctagcccgtttatcacctctc
aaacccgaagcactacgaggaatcgtcagacgacaaccactgagtcttaacttaactggt
actaacatcagtcataaacaactagcgtggctgttgccacggctacccaatctagaagag
ctctatctaggtagaagttcctggagtgctgtgacagctctggcttcctcaaattgccct
ctgttgcaagtactcgatcttcagtgggtgagtggtgtggaagacggcatacttgaattg
ctttgctcacatctcgacgaacaccgtccaggcttggtggatgaccgatcgaaactcaga
gacctaaagaagctccatttgacgggaagtgatatcacagacaagggtttaagctgtttg
ataccctgtatgagcagtttgagtgtcctagacatcagctattgtggaggccttacagat
gctggtctcagggagatggtaaatgagacatctcccatagcaaagagtctcatcgagctg
aatgtgtcaggctgccgtaaactcaccgatgaattcttacccgatttgagacattgtcca
aagttgaagaaagttgtggcccattcgtgccctcttttcaccaaagatgaatgggaagcc
ttttctcgtgagtttggagtcgagatctgcttcactaagccaagggggagacctacttga

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